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Sample GSM96932 Query DataSets for GSM96932
Status Public on Aug 08, 2006
Title wt 74hrs DD B
Sample type RNA
 
Source name adult mouse whole adrenal 74hrs after lights off
Organism Mus musculus
Characteristics Strain: C57B/6J
Gender: male
Age: 3 months
Tissue: whole adrenal
Treatment protocol 2 weeks entrainment to LD 12:12
Extracted molecule total RNA
Extraction protocol RNeasy Micor Kit (QIAGEN)
Label biotin
Label protocol http://www.rzpd.de/protocols
 
Hybridization protocol http://www.rzpd.de/protocols
Scan protocol http://www.rzpd.de/protocols
Description sample is part of a series (of 12 time points) to identify circadian clock regulated genes in the murine adrenal
Data processing expression data were normalized and modelled (PM/MM model) using Dchip 1.3
 
Submission date Feb 16, 2006
Last update date May 21, 2007
Contact name Henrik Oster
E-mail(s) [email protected]
Organization name University of Lübeck
Department CBBM
Street address Marie Curie Street
City Lübeck
ZIP/Postal code 23562
Country Germany
 
Platform ID GPL1261
Series (2)
GSE4238 rhythmic transcriptome in the murine wt adrenal
GSE4253 Wildtype and Per2Cry1 double mutant mice: temporal gene expression profiling of adrenal gland

Data table header descriptions
ID_REF
VALUE normalized expression value
CALL expression call; P- present, M - marginally expressed, A - absent

Data table
ID_REF VALUE CALL
AFFX-BioB-5_at 236.080 P
AFFX-BioB-M_at 284.885 P
AFFX-BioB-3_at 291.454 P
AFFX-BioC-5_at 352.097 P
AFFX-BioC-3_at 410.348 P
AFFX-BioDn-5_at 1521.689 P
AFFX-BioDn-3_at 2809.807 P
AFFX-CreX-5_at 6188.028 P
AFFX-CreX-3_at 6334.031 P
AFFX-DapX-5_at 74.854 A
AFFX-DapX-M_at 80.578 A
AFFX-DapX-3_at 23.844 A
AFFX-LysX-5_at 86.549 A
AFFX-LysX-M_at 232.439 A
AFFX-LysX-3_at 57.290 A
AFFX-PheX-5_at 99.445 A
AFFX-PheX-M_at 353.409 A
AFFX-PheX-3_at 200.356 A
AFFX-ThrX-5_at 86.274 A
AFFX-ThrX-M_at 375.800 A

Total number of rows: 45101

Table truncated, full table size 940 Kbytes.




Supplementary data files not provided

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