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Sample GSM96927 Query DataSets for GSM96927
Status Public on Aug 08, 2006
Title wt 54hrs DD B
Sample type RNA
 
Source name adult mouse whole adrenal 54hrs after lights off
Organism Mus musculus
Characteristics Strain: C57B/6J
Gender: male
Age: 3 months
Tissue: whole adrenal
Treatment protocol 2 weeks entrainment to LD 12:12
Extracted molecule total RNA
Extraction protocol RNeasy Micro Kit (QUAGEN)
Label biotin
Label protocol http://www.rzpd.de/protocols
 
Hybridization protocol http://www.rzpd.de/protocols
Scan protocol http://www.rzpd.de/protocols
Description sample is part of a series (of 12 time points) to identify circadian clock regulated genes in the murine adrenal
Data processing expression data were normalized and modelled (PM/MM model) using Dchip 1.3
 
Submission date Feb 16, 2006
Last update date May 21, 2007
Contact name Henrik Oster
E-mail(s) [email protected]
Organization name University of Lübeck
Department CBBM
Street address Marie Curie Street
City Lübeck
ZIP/Postal code 23562
Country Germany
 
Platform ID GPL1261
Series (2)
GSE4238 rhythmic transcriptome in the murine wt adrenal
GSE4253 Wildtype and Per2Cry1 double mutant mice: temporal gene expression profiling of adrenal gland

Data table header descriptions
ID_REF
VALUE normalized expression value
CALL expression call; P- present, M - marginally expressed, A - absent

Data table
ID_REF VALUE CALL
AFFX-BioB-5_at 148.713 P
AFFX-BioB-M_at 127.755 P
AFFX-BioB-3_at 197.497 P
AFFX-BioC-5_at 350.346 P
AFFX-BioC-3_at 380.657 P
AFFX-BioDn-5_at 1185.27 P
AFFX-BioDn-3_at 2113.11 P
AFFX-CreX-5_at 5487 P
AFFX-CreX-3_at 5552.71 P
AFFX-DapX-5_at 70.8718 A
AFFX-DapX-M_at 78.8313 A
AFFX-DapX-3_at 32.7639 A
AFFX-LysX-5_at 81.2564 A
AFFX-LysX-M_at 114.415 A
AFFX-LysX-3_at 181.742 P
AFFX-PheX-5_at 110.108 A
AFFX-PheX-M_at 518.419 A
AFFX-PheX-3_at 197.649 A
AFFX-ThrX-5_at 104.444 A
AFFX-ThrX-M_at 332.644 A

Total number of rows: 45101

Table truncated, full table size 936 Kbytes.




Supplementary data files not provided

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