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Sample GSM96631 Query DataSets for GSM96631
Status Public on Aug 08, 2006
Title wt 42hrs DD
Sample type RNA
 
Source name adult mouse whole adrenal 42hrs after lights off
Organism Mus musculus
Characteristics Strain: C57B/6J Gender: male Age: 3 months Tissue: whole adrenal
Treatment protocol 2 weeks entrainment to LD 12:12
Extracted molecule total RNA
Extraction protocol RNeasy Micro Kit (QIAGEN)
Label biotin
Label protocol http://www.rzpd.de/protocols
 
Hybridization protocol http://www.rzpd.de/protocols
Scan protocol http://www.rzpd.de/protocols
Description sample is part of a series (of 12 time points) to identify circadian clock regulated genes in the murine adrenal
Data processing expression data were normalized and modelled (PM/MM model) using Dchip 1.3
 
Submission date Feb 14, 2006
Last update date May 21, 2007
Contact name Henrik Oster
E-mail(s) [email protected]
Organization name University of Lübeck
Department CBBM
Street address Marie Curie Street
City Lübeck
ZIP/Postal code 23562
Country Germany
 
Platform ID GPL1261
Series (2)
GSE4238 rhythmic transcriptome in the murine wt adrenal
GSE4253 Wildtype and Per2Cry1 double mutant mice: temporal gene expression profiling of adrenal gland

Data table header descriptions
ID_REF
VALUE normalized expression value
CALL expression call; P- present, M - marginally expressed, A - absent

Data table
ID_REF VALUE CALL
AFFX-BioB-5_at 233.977 P
AFFX-BioB-M_at 261.254 P
AFFX-BioB-3_at 274.907 P
AFFX-BioC-5_at 322.91 P
AFFX-BioC-3_at 397.999 P
AFFX-BioDn-5_at 1420.84 P
AFFX-BioDn-3_at 2841.82 P
AFFX-CreX-5_at 5833.34 P
AFFX-CreX-3_at 6183.64 P
AFFX-DapX-5_at 84.3864 P
AFFX-DapX-M_at 83.499 A
AFFX-DapX-3_at 34.405 A
AFFX-LysX-5_at 84.3379 A
AFFX-LysX-M_at 231.827 A
AFFX-LysX-3_at 41.6857 P
AFFX-PheX-5_at 101.057 A
AFFX-PheX-M_at 370.63 A
AFFX-PheX-3_at 182.459 A
AFFX-ThrX-5_at 93.7531 A
AFFX-ThrX-M_at 405.883 A

Total number of rows: 45101

Table truncated, full table size 936 Kbytes.




Supplementary data files not provided

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