NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM9656 Query DataSets for GSM9656
Status Public on Aug 06, 2004
Title nl004
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:104, Count:32
Corner- Avg:5848, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:40.850620,SFGene:All
Background:Avg:39.45,Stdev:0.77,Max:41.3,Min:37.3
Noise:Avg:1.34,Stdev:0.05,Max:1.5,Min:1.2
RawQ:1.83
Keywords = ALL
Lot batch =
 
Submission date Sep 05, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) [email protected]
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (8)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643 ASP sensitive all ALL
GSE648 VCR sensitive all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 678.7 0.054470
1053_at 42.9 0.378184
117_at 42.0 0.697453
121_at 1838.0 0.017001
1255_g_at 95.7 0.561639
1294_at 879.9 0.007543
1316_at 258.9 0.218983
1320_at 190.0 0.602006
1405_i_at 112.5 0.801637
1431_at 204.1 0.138765
1438_at 413.4 0.250724
1487_at 137.7 0.438361
1494_f_at 490.1 0.031336
1598_g_at 1054.3 0.117160
160020_at 483.6 0.107301
1729_at 160.5 0.479380
1773_at 427.0 0.218983
177_at 219.7 0.418069
179_at 1511.5 0.073830
1861_at 366.7 0.218983

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.




Supplementary file Size Download File type/resource
GSM9656.CEL.gz 3.0 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap