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Sample GSM93967 Query DataSets for GSM93967
Status Public on Jan 29, 2006
Title 2408day7_20Gy
Sample type RNA
 
Source name THP-1 cells irradiated
Organism Homo sapiens
Characteristics myelomonocytic leukemia cell line
Biomaterial provider LGC Promochem, Wesel, Germany
Treatment protocol irradiated with 20Gy
Growth protocol cultivated in RPMI1640 medium, 10% FCS, 1mM L-glutamine, 1% penicillin/streptomycin
Extracted molecule total RNA
Extraction protocol RNeasy Mini-Kit including Qiashredder columns (Qiagen)
Label biotin labeled
Label protocol one cycle target labeling assay
 
Hybridization protocol according to affymetrix
Scan protocol Affymetrix Gene Chip Scanner 3000
Description THP-1 cells harvested 7 days post irradiation
Data processing GCOS 1.4.0.036 scaled to 500
 
Submission date Jan 27, 2006
Last update date Jan 27, 2006
Contact name Henning Witt
E-mail(s) [email protected]
Phone ++49-30-450578727
Organization name Max Planck Institute for Molecular Genetics
Department Hans Lehrach
Lab Patricia Ruiz
Street address Ihnestrasse 65
City Berlin
ZIP/Postal code 14195
Country Germany
 
Platform ID GPL570
Series (1)
GSE4110 Effect of ionizing radiation on procoagulant activity

Data table header descriptions
ID_REF
VALUE normalized intensity
ABS_CALL detection call (absent or present)

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 65.6 P
AFFX-BioB-M_at 79.1 P
AFFX-BioB-3_at 46.6 P
AFFX-BioC-5_at 157.2 P
AFFX-BioC-3_at 209 P
AFFX-BioDn-5_at 348.7 P
AFFX-BioDn-3_at 956.7 P
AFFX-CreX-5_at 2261.4 P
AFFX-CreX-3_at 2824.8 P
AFFX-DapX-5_at 48.8 P
AFFX-DapX-M_at 161 P
AFFX-DapX-3_at 277.2 P
AFFX-LysX-5_at 14.5 P
AFFX-LysX-M_at 20.8 M
AFFX-LysX-3_at 50.9 P
AFFX-PheX-5_at 15.1 P
AFFX-PheX-M_at 33.3 P
AFFX-PheX-3_at 37.3 P
AFFX-ThrX-5_at 13.4 P
AFFX-ThrX-M_at 32.6 P

Total number of rows: 54675

Table truncated, full table size 925 Kbytes.




Supplementary data files not provided

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