NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM93198 Query DataSets for GSM93198
Status Public on Jul 01, 2006
Title AG825-treated, 6h after UV, Replicate B
Sample type RNA
 
Source name dorsal mouse skin
Organism Mus musculus
Characteristics DMSO-treated, sham UV exposed
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from the shaved dorsal skin using Trizol (Invitrogen) followed by RNeasy kit (Qiagen).
Label biotin
Label protocol 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description AG825-treated, harvested 6h after UV exposure
Data processing Robust Multichip Average (RMA) of Affymetrix CEL file
 
Submission date Jan 18, 2006
Last update date Jan 19, 2006
Contact name Laura A Hansen
E-mail(s) [email protected]
Phone 402-280-4085
Fax 402-280-2690
Organization name Creighton University School of Medicine
Department Biomedical Sciences
Street address 2500 California Plaza
City Omaha
State/province NE
ZIP/Postal code 68178
Country USA
 
Platform ID GPL339
Series (1)
GSE4066 Erbb2 regulates inflammation and proliferation in the skin after ultraviolet irradiation.

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
1449898_at 7.616943
1423472_at 11.140652
1423473_at 3.999753
1448729_a_at 7.026501
1452357_at 8.529158
1420876_a_at 5.251954
1420877_at 5.287487
1424181_at 6.684652
1431973_at 6.889943
1436819_at 5.25376
1460286_at 4.948277
1454610_at 10.745032
1426802_at 7.902596
1417038_at 9.928002
1448903_at 10.35726
1427722_at 4.051602
1419072_at 6.261056
1425946_at 7.285917
1434906_at 5.548765
1416980_at 7.085528

Total number of rows: 19645

Table truncated, full table size 391 Kbytes.




Supplementary file Size Download File type/resource
GSM93198.CEL.gz 3.5 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap