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Sample GSM93196 Query DataSets for GSM93196
Status Public on Jul 01, 2006
Title AG825-treated, Sham UV, Replicate E
Sample type RNA
 
Source name dorsal mouse skin
Organism Mus musculus
Characteristics DMSO-treated, sham UV exposed
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from the shaved dorsal skin using Trizol (Invitrogen) followed by RNeasy kit (Qiagen).
Label biotin
Label protocol 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description AG825-treated, harvested 6h after Sham UV exposure
Data processing Robust Multichip Average (RMA) of Affymetrix CEL file
 
Submission date Jan 18, 2006
Last update date Jan 19, 2006
Contact name Laura A Hansen
E-mail(s) [email protected]
Phone 402-280-4085
Fax 402-280-2690
Organization name Creighton University School of Medicine
Department Biomedical Sciences
Street address 2500 California Plaza
City Omaha
State/province NE
ZIP/Postal code 68178
Country USA
 
Platform ID GPL339
Series (1)
GSE4066 Erbb2 regulates inflammation and proliferation in the skin after ultraviolet irradiation.

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
1449898_at 7.761534
1423472_at 10.968528
1423473_at 3.995771
1448729_a_at 6.633867
1452357_at 9.310844
1420876_a_at 5.364994
1420877_at 5.315362
1424181_at 6.460446
1431973_at 6.985976
1436819_at 5.347805
1460286_at 5.140103
1454610_at 10.770196
1426802_at 8.661243
1417038_at 9.932766
1448903_at 10.250889
1427722_at 4.041497
1419072_at 6.204097
1425946_at 7.52625
1434906_at 5.672614
1416980_at 7.151516

Total number of rows: 19645

Table truncated, full table size 391 Kbytes.




Supplementary file Size Download File type/resource
GSM93196.CEL.gz 3.6 Mb (ftp)(http) CEL

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