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Sample GSM9189 Query DataSets for GSM9189
Status Public on Aug 23, 2003
Title Thyroid hormone effect on cardiomyocytes; Sample 8
Sample type RNA
 
Channel 1
Source name CGS treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
Channel 2
Source name Hypothyroid cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
 
Description Effect of thyroid hormone (T3) and its structural analogues like DITPA and CGS on primary culture of cardiomyocytes.

Comparison of hypothyroid and CGS treated cells. CGS represents channel 1 and hypothyroid is channel 2. Each gene (oligo) was spotted in triplicate.
 
Submission date Aug 20, 2003
Last update date May 27, 2005
Contact name Niranjan Maitra
E-mail(s) [email protected]
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL333
Series (1)
GSE602 T3,DITPA and CGS

Data table header descriptions
ID_REF
CH1_MEAN channel 1 mean
CH1_SD channel 1 standard deviation
CH1_BKG_MEAN channel 1 background mean
CH1_BKG_SD channel 1 background standard deviation
CH2_MEAN channel 2 mean
CH2_SD channel 2 standard deviation
CH2_BKG_MEAN channel 2 background mean
CH2_BKG_SD channel 2 background standard deviation
VALUE log2 ratio (channel1/channel2)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD VALUE
4 530.0475 42.96041 472.4186 47.42205 773.6126 27.39454 749.466 33.53516 -3.92E-03
10 704.9716 39.04188 420.3204 19.13929 851.8697 31.1762 726.0504 20.38031 -1.06E-01
12 529.2394 33.0339 459.4412 21.88847 756.9557 23.55298 727.9477 20.75352 -1.56E-01
21 596.0171 25.4518 536.5545 21.66903 760.6651 22.31034 737.6491 20.45328 6.39E-02
22 711.3381 22.16944 727.8043 64.13782 762.2702 19.25451 767.5824 24.37995 -2.82E-02
28 529.9398 37.87193 495.6448 21.64901 732.8754 19.29399 731.0921 21.64211 1.69E-01
31 3329.7651 1074.86214 443.0723 22.34957 2504.6047 662.02783 729.7148 21.59913 -4.48E-01
42 2128.8664 634.11003 418.4764 20.09834 1380.7268 248.39361 729.2299 19.79951 1.71E-01
44 526.7762 39.83005 466.0618 21.00617 761.7357 26.4996 727.9825 20.48159 -4.82E-01
47 788.2553 42.72113 546.0754 20.79135 870.825 26.55071 737.9784 21.14989 -5.43E-01
57 825 51.84715 1042.8358 484.59033 781.5 20.58528 798.6425 41.9736 -2.62E-02
58 802.2135 37.29133 759.5193 28.35442 755.3565 23.08296 742.1155 20.03699 2.36E-01
59 413.9159 19.57298 363.4977 17.03672 732.6846 19.86086 717.0389 18.61631 3.10E-01
60 588.2676 68.49355 309.269 14.82687 866.797 45.53592 714.4224 20.03384 -2.73E-01
69 1946.7668 448.43381 310.4528 16.78071 1817.9324 305.41609 717.5656 19.56528 -5.75E-01
73 473.9229 46.26376 326.9591 14.57175 808.6089 34.72129 716.3894 18.90164 -6.04E-01
80 1409.6132 246.59573 384.6484 17.19582 1304.6143 160.87164 728.6704 19.86162 -4.87E-01
84 701.79 23.27482 690.4863 23.76965 740.4996 18.51394 738.7396 19.114 8.16E-02
93 558.0482 44.68654 352.8808 15.91849 799.7007 31.09112 716.0644 19.79758 1.38E-01
98 540.7123 56.58199 307.9222 14.52997 810.7327 31.08096 711.0171 19.65163 6.22E-02

Total number of rows: 4273

Table truncated, full table size 362 Kbytes.




Supplementary data files not provided
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