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Sample GSM9184 Query DataSets for GSM9184
Status Public on Aug 23, 2003
Title Thyroid hormone effect on cardiomyocytes; Sample 3
Sample type RNA
 
Channel 1
Source name DITPA treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
Channel 2
Source name Hypothyroid cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
 
Description Effect of thyroid hormone (T3) and its structural analogues like DITPA and CGS on primary culture of cardiomyocytes.

Comparison of hypothyroid and DITPA treated cells. Hypothyroid represents channel 2 and DITPA is channel 1. Each gene (oligo) was spotted in triplicate.
 
Submission date Aug 20, 2003
Last update date May 27, 2005
Contact name Niranjan Maitra
E-mail(s) [email protected]
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL333
Series (1)
GSE602 T3,DITPA and CGS

Data table header descriptions
ID_REF
CH1_MEAN channel 1 mean
CH1_SD channel 1 standard deviation
CH1_BKG_MEAN channel 1 background mean
CH1_BKG_SD channel 1 background standard deviation
CH2_MEAN channel 2 mean
CH2_SD channel 2 standard deviation
CH2_BKG_MEAN channel 2 background mean
CH2_BKG_SD channel 2 background standard deviation
VALUE log2 ratio (channel1/channel2)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD VALUE
4 342.6542 18.617377 320.2916 17.30914 612.6156 18.20971 604.9519 17.72465 1.43E-01
10 505.3403 45.128611 339.5332 20.424306 695.3924 30.61016 607.6041 19.25994 -4.10E-01
12 422.9216 30.432278 362.8043 23.592689 627.2267 20.4775 612.884 19.05253 4.10E-01
21 4399.3423 220.06646 4000.8302 1200.296444 1307.807 47.67428 1227.4579 214.59019 4.84E-01
22 500.1429 18.121842 503.9487 21.815035 637.7617 17.16238 637.2598 18.62407 -3.92E-02
28 317.5478 30.291356 295.7854 16.533066 605.2249 17.30597 602.3665 17.15871 1.88E-01
31 2449.1709 1446.758382 332.9073 18.756802 1618.4939 675.11344 609.036 18.92835 -2.30E-01
42 1334.6215 398.661234 355.065 31.953167 1005.6537 163.12166 609.0669 18.36788 -3.25E-02
44 425.3298 27.042086 349.621 20.552547 630.1511 22.07812 610.0161 18.50275 4.04E-01
47 576.7854 43.200779 422.4313 19.622344 710.2325 27.53199 621.6808 19.21199 -6.10E-01
57 552.1378 20.588959 547.966 22.432609 639.183 19.08567 639.9625 18.72715 -3.02E-02
58 316.0343 17.26765 281.6018 29.18965 610.2062 18.33601 598.3145 18.47592 1.51E-01
59 263.8558 19.943105 277.8973 234.102643 600.6902 17.05955 598.4061 35.54314 5.41E-03
60 472.3187 70.627037 259.3646 12.600072 699.1437 38.84597 600.2693 17.34761 -1.84E-01
69 2454.3024 952.405396 251.7266 17.976831 1587.2103 423.05544 621.3819 18.44615 -8.87E-02
73 318.5783 25.714966 210.2315 11.170539 647.1287 20.31227 592.5099 18.11833 -4.82E-01
80 1042.6202 206.206817 247.1988 16.656814 925.3628 96.21576 609.1461 19.8874 -9.11E-02
84 283.405 17.955558 258.8416 12.506831 613.4645 20.56309 595.8167 17.97125 -4.06E-01
93 416.3628 35.990945 265.1161 14.202465 643.0813 22.13325 597.026 18.24029 3.48E-01
98 425.2063 55.765955 254.3479 13.17455 678.3888 32.59135 600.172 17.3928 -1.62E-01

Total number of rows: 4273

Table truncated, full table size 371 Kbytes.




Supplementary data files not provided
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