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Sample GSM878608 Query DataSets for GSM878608
Status Public on Aug 21, 2012
Title Wild-type Type II 1_8_9_04
Sample type RNA
 
Source name SPC WT lung (adult)
Organism Mus musculus
Characteristics sample type: Primary culture of typeII cells collected from SPC WT lung (adult)
age: adult
cell type: type II lung epithelial
genotype: Surfactant Proteiin C WT
genetic background: 129S6/SvEvTac
Extracted molecule total RNA
Extraction protocol standard Affymetrix protocol
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Data was processed/normalized by MAS 5.0 using Affymetrix Expression Console version 1.1.
 
Submission date Feb 21, 2012
Last update date Aug 21, 2012
Contact name Yan Xu
E-mail(s) [email protected]
Phone 513-6368921
Organization name Cincinnati Children's Hospital Medical Center
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE35989 Surfactant Protein C knockout

Data table header descriptions
ID_REF
VALUE MAS 5.0 signal
ABS_CALL Flag
DETECTION PVALUE Dectection P-value

Data table
ID_REF VALUE ABS_CALL DETECTION PVALUE
AFFX-BioB-5_at 2435.5 P 0.000095
AFFX-BioB-M_at 4856.7 P 0.000044
AFFX-BioB-3_at 3175 P 0.000044
AFFX-BioC-5_at 9767.5 P 0.000044
AFFX-BioC-3_at 10490.2 P 0.000044
AFFX-BioDn-5_at 17757.1 P 0.000044
AFFX-BioDn-3_at 28674.9 P 0.000044
AFFX-CreX-5_at 82430.3 P 0.000052
AFFX-CreX-3_at 111251.1 P 0.000044
AFFX-DapX-5_at 39.4 A 0.603089
AFFX-DapX-M_at 47.4 A 0.5
AFFX-DapX-3_at 19 A 0.922016
AFFX-LysX-5_at 10.7 A 0.814911
AFFX-LysX-M_at 16.7 A 0.957065
AFFX-LysX-3_at 52.1 A 0.51489
AFFX-PheX-5_at 89.9 A 0.227617
AFFX-PheX-M_at 57.4 A 0.559354
AFFX-PheX-3_at 40.7 A 0.514891
AFFX-ThrX-5_at 153.6 A 0.48511
AFFX-ThrX-M_at 73 A 0.239063

Total number of rows: 45101

Table truncated, full table size 1235 Kbytes.




Supplementary file Size Download File type/resource
GSM878608_Wildtype_Type_II_1_8_9_04_MOE_430_2.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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