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Sample GSM864549 Query DataSets for GSM864549
Status Public on Jan 27, 2012
Title Fibroblast iCAF 4d #626
Sample type RNA
 
Source name Normal omental fibroblast transfected with 3 miRNAs, 4d, patient #626
Organism Homo sapiens
Characteristics cell type: human cancer-associated fibroblast transfected with 3 miRNAs, 4d
patient no.: #626
time: 4d
transfection: miR-155, anti-miR-31 and anti-miR-214
Extracted molecule total RNA
Extraction protocol standard Affymetrix protocol
Label standard Affymetrix protocol
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Normalization method: MAS5.0
 
Submission date Jan 20, 2012
Last update date Jan 27, 2012
Contact name Youjia Hua
E-mail(s) [email protected]
Phone (312) 503-2883
Fax (312) 503-0189
Organization name Northwestern University
Street address 303 East Superior Street, Lurie 6-220
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL570
Series (2)
GSE35252 NOF vs. iCAF 4d
GSE35364 Cancer-associated fibroblast transfected with miR-155, anti-miR-31 and anti-miR-214

Data table header descriptions
ID_REF
VALUE MAS 5.0 signal
ABS_CALL Present or absent detection
DETECTION P-VALUE Significance of detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 315.025 P 0.000662269
AFFX-BioB-M_at 446.649 P 5.16732e-05
AFFX-BioB-3_at 279.791 P 0.000509415
AFFX-BioC-5_at 780.017 P 5.16732e-05
AFFX-BioC-3_at 1155.06 P 4.42873e-05
AFFX-BioDn-5_at 2429.9 P 4.42873e-05
AFFX-BioDn-3_at 4575.54 P 0.000169227
AFFX-CreX-5_at 12170.7 P 5.16732e-05
AFFX-CreX-3_at 14465.5 P 4.42873e-05
AFFX-DapX-5_at 2050.83 P 4.42873e-05
AFFX-DapX-M_at 3699.72 P 0.000195116
AFFX-DapX-3_at 3857.93 P 5.16732e-05
AFFX-LysX-5_at 196.871 P 0.000195116
AFFX-LysX-M_at 216.273 P 0.00110197
AFFX-LysX-3_at 440.585 P 6.02111e-05
AFFX-PheX-5_at 332.444 P 5.16732e-05
AFFX-PheX-M_at 359.078 P 0.000146581
AFFX-PheX-3_at 265.414 P 7.00668e-05
AFFX-ThrX-5_at 273.44 P 0.000126798
AFFX-ThrX-M_at 505.108 P 6.02111e-05

Total number of rows: 54675

Table truncated, full table size 1637 Kbytes.




Supplementary file Size Download File type/resource
GSM864549_NOF626TripleDay4.CEL.gz 5.2 Mb (ftp)(http) CEL
GSM864549_NOF626TripleDay4.CHP.gz 295.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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