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Sample GSM864545 Query DataSets for GSM864545
Status Public on Jan 27, 2012
Title Fibroblast iCAF 2d #474
Sample type RNA
 
Source name Normal omental fibroblast transfected with 3 miRNAs, 2d, patient #474
Organism Homo sapiens
Characteristics cell type: human cancer-associated fibroblast transfected with 3 miRNAs, 2d
patient no.: #474
time: 2d
transfection: miR-155, anti-miR-31 and anti-miR-214
Extracted molecule total RNA
Extraction protocol standard Affymetrix protocol
Label standard Affymetrix protocol
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Normalization method: MAS5.0
 
Submission date Jan 20, 2012
Last update date Jan 27, 2012
Contact name Youjia Hua
E-mail(s) [email protected]
Phone (312) 503-2883
Fax (312) 503-0189
Organization name Northwestern University
Street address 303 East Superior Street, Lurie 6-220
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL570
Series (2)
GSE35251 NOF vs. iCAF 2d
GSE35364 Cancer-associated fibroblast transfected with miR-155, anti-miR-31 and anti-miR-214

Data table header descriptions
ID_REF
VALUE MAS 5.0 signal
ABS_CALL Present or absent detection
DETECTION P-VALUE Significance of detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 302.053 P 0.000856509
AFFX-BioB-M_at 420.652 P 6.02111e-05
AFFX-BioB-3_at 250.708 P 0.000169227
AFFX-BioC-5_at 712.441 P 5.16732e-05
AFFX-BioC-3_at 1042.53 P 5.16732e-05
AFFX-BioDn-5_at 2246.81 P 4.42873e-05
AFFX-BioDn-3_at 4559.32 P 0.000126798
AFFX-CreX-5_at 13747.6 P 5.16732e-05
AFFX-CreX-3_at 15212.4 P 4.42873e-05
AFFX-DapX-5_at 2715.31 P 4.42873e-05
AFFX-DapX-M_at 6819.7 P 5.16732e-05
AFFX-DapX-3_at 9107.04 P 4.42873e-05
AFFX-LysX-5_at 578.848 P 4.42873e-05
AFFX-LysX-M_at 817.886 P 4.42873e-05
AFFX-LysX-3_at 1641.59 P 5.16732e-05
AFFX-PheX-5_at 698.184 P 4.42873e-05
AFFX-PheX-M_at 1083.65 P 4.42246e-05
AFFX-PheX-3_at 914.111 P 4.42873e-05
AFFX-ThrX-5_at 398.166 P 0.00010954
AFFX-ThrX-M_at 982.106 P 4.42873e-05

Total number of rows: 54675

Table truncated, full table size 1637 Kbytes.




Supplementary file Size Download File type/resource
GSM864545_NOF474_Triple.CEL.gz 5.0 Mb (ftp)(http) CEL
GSM864545_NOF474_Triple.CHP.gz 296.9 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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