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Sample GSM864522 Query DataSets for GSM864522
Status Public on Jan 27, 2012
Title Fibroblast coCAF 7d #612
Sample type RNA
 
Source name Normal omental fibroblast co-cultured with ovarian cancer cells, 7d, patient #612
Organism Homo sapiens
Characteristics cell type: human cancer-associated fibroblast co-cultured with ovarian cancer cells, 7d
patient no.: #612
time: 7d
Extracted molecule total RNA
Extraction protocol standard Affymetrix protocol
Label standard Affymetrix protocol
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Normalization method: MAS5.0
 
Submission date Jan 20, 2012
Last update date Jan 27, 2012
Contact name Youjia Hua
E-mail(s) [email protected]
Phone (312) 503-2883
Fax (312) 503-0189
Organization name Northwestern University
Street address 303 East Superior Street, Lurie 6-220
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL570
Series (2)
GSE35250 NOF vs. coCAF 7d
GSE35364 Cancer-associated fibroblast transfected with miR-155, anti-miR-31 and anti-miR-214

Data table header descriptions
ID_REF
ABS_CALL Present or absent detection
DETECTION P-VALUE Significance of detection
VALUE MAS 5.0 signal

Data table
ID_REF ABS_CALL DETECTION P-VALUE VALUE
AFFX-BioB-5_at P 0.000445901 456.152
AFFX-BioB-M_at P 4.42873e-05 566.42
AFFX-BioB-3_at P 0.000169227 398.132
AFFX-BioC-5_at P 5.16732e-05 1007.15
AFFX-BioC-3_at P 4.42873e-05 1438.84
AFFX-BioDn-5_at P 4.42873e-05 3094.62
AFFX-BioDn-3_at P 7.00668e-05 5433.61
AFFX-CreX-5_at P 5.16732e-05 16944.1
AFFX-CreX-3_at P 4.42873e-05 18165.3
AFFX-DapX-5_at P 6.02111e-05 1166.05
AFFX-DapX-M_at P 0.000146581 2490.55
AFFX-DapX-3_at P 5.16732e-05 2625.58
AFFX-LysX-5_at P 0.000169227 151.844
AFFX-LysX-M_at P 0.00401721 135.369
AFFX-LysX-3_at P 7.00668e-05 297.284
AFFX-PheX-5_at P 9.4506e-05 192.825
AFFX-PheX-M_at P 9.4506e-05 242.953
AFFX-PheX-3_at P 9.4506e-05 197.744
AFFX-ThrX-5_at P 0.000146581 175.974
AFFX-ThrX-M_at P 0.00010954 310.635

Total number of rows: 54675

Table truncated, full table size 1642 Kbytes.




Supplementary file Size Download File type/resource
GSM864522_3_AM5_612cocultured.CHP.gz 296.2 Kb (ftp)(http) CHP
GSM864522_AM5_612cocultured.CEL.gz 5.0 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data provided as supplementary file

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