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Sample GSM864180 Query DataSets for GSM864180
Status Public on Jan 27, 2012
Title Fibroblast coCAF 7d #603
Sample type RNA
 
Source name Normal omental fibroblast co-cultured with ovarian cancer cells, 7d, patient #603
Organism Homo sapiens
Characteristics cell type: human cancer-associated fibroblast co-cultured with ovarian cancer cells, 7d
patient no.: #603
time: 7d
Extracted molecule total RNA
Extraction protocol standard Affymetrix protocol
Label standard Affymetrix protocol
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Data processing Normalization method: MAS5.0
 
Submission date Jan 19, 2012
Last update date Jan 27, 2012
Contact name Youjia Hua
E-mail(s) [email protected]
Phone (312) 503-2883
Fax (312) 503-0189
Organization name Northwestern University
Street address 303 East Superior Street, Lurie 6-220
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL570
Series (2)
GSE35250 NOF vs. coCAF 7d
GSE35364 Cancer-associated fibroblast transfected with miR-155, anti-miR-31 and anti-miR-214

Data table header descriptions
ID_REF
VALUE MAS 5.0 signal
ABS_CALL Present or absent detection
DETECTION P-VALUE Significance of detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 360.872 P 0.000296708
AFFX-BioB-M_at 453.893 P 4.42873e-05
AFFX-BioB-3_at 333.169 P 0.000126798
AFFX-BioC-5_at 813.476 P 5.16732e-05
AFFX-BioC-3_at 1150.01 P 9.4506e-05
AFFX-BioDn-5_at 2477.21 P 4.42873e-05
AFFX-BioDn-3_at 5123.83 P 9.4506e-05
AFFX-CreX-5_at 13566.9 P 5.16732e-05
AFFX-CreX-3_at 16969.2 P 4.42873e-05
AFFX-DapX-5_at 873.48 P 7.00668e-05
AFFX-DapX-M_at 2119.14 P 0.000445901
AFFX-DapX-3_at 2611.64 P 5.16732e-05
AFFX-LysX-5_at 134.12 P 0.000581214
AFFX-LysX-M_at 156.64 P 0.00359458
AFFX-LysX-3_at 252.228 P 0.00010954
AFFX-PheX-5_at 202.248 P 5.16732e-05
AFFX-PheX-M_at 194.501 P 0.000258358
AFFX-PheX-3_at 208.69 P 5.16732e-05
AFFX-ThrX-5_at 199.205 P 0.000445901
AFFX-ThrX-M_at 328.796 P 0.000340305

Total number of rows: 54675

Table truncated, full table size 1634 Kbytes.




Supplementary file Size Download File type/resource
GSM864180_1_AM1_603cocultured.CEL.gz 4.7 Mb (ftp)(http) CEL
GSM864180_AM1_603cocultured.CHP.gz 297.7 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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