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Sample GSM86270 Query DataSets for GSM86270
Status Public on Feb 08, 2007
Title CT54;liver;NONE;C57/BL6;37463
Sample type RNA
 
Source name CT54;liver;NONE;C57/BL6;37463
Organism Mus musculus
Characteristics CT54;liver;NONE;C57/BL6;37463
Extracted molecule total RNA
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures except for use of a custom 24-channel fluidics machine
Scan protocol standard Affymetrix procedures
Description Circadian Liver_48hr_gcrma
Data processing gcRMA
 
Submission date Dec 06, 2005
Last update date Feb 08, 2007
Contact name John R Walker
E-mail(s) [email protected]
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1073
Series (2)
GSE3748 Circadian liver_wt and Clock mutants
GSE3751 Circadian rhythm in clock mutants

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript

Data table
ID_REF VALUE
AFFX-18SRNAMur/X00686_3_at 414.8263
AFFX-18SRNAMur/X00686_5_at 408.5977
AFFX-18SRNAMur/X00686_M_at 89.40038
AFFX-b-ActinMur/M12481_3_at 126821.7
AFFX-b-ActinMur/M12481_5_at 70457.52
AFFX-b-ActinMur/M12481_M_at 43501.92
AFFX-BioB-3_at 1906.06
AFFX-BioB-5_at 2986.969
AFFX-BioB-M_at 8944.108
AFFX-BioC-3_at 7272.39
AFFX-BioC-5_at 5594.392
AFFX-BioDn-3_at 49243.59
AFFX-BioDn-5_at 12805.67
AFFX-CreX-3_at 312895.2
AFFX-CreX-5_at 233614.9
AFFX-DapX-3_at 83.63143
AFFX-DapX-5_at 108.9678
AFFX-DapX-M_at 104.1604
AFFX-GapdhMur/M32599_3_at 174458.1
AFFX-GapdhMur/M32599_5_at 97709.77

Total number of rows: 31373

Table truncated, full table size 735 Kbytes.




Supplementary file Size Download File type/resource
GSM86270.CEL.gz 5.1 Mb (ftp)(http) CEL

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