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Sample GSM849816 Query DataSets for GSM849816
Status Public on Jan 01, 2013
Title 4uM-Exp2
Sample type RNA
 
Source name 8-4uM-Exp2
Organism Caenorhabditis elegans
Characteristics agent: 4uM Heme
genotype/variation: hrg-2 Mutant
developmental stage: mid-late L4 stage
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini kit for RNA isolation.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Data processing RMA by software Partek (Version 6.5 (6.11.0321))
 
Submission date Dec 15, 2011
Last update date Jan 01, 2013
Contact name WeiPing Chen
E-mail(s) [email protected]
Phone 301-496-0175
Organization name NIDDK/NIH
Department GCL
Lab Genomics Core Lab
Street address Bldg 8, Room 1A11, NIDDK/NIH
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL200
Series (1)
GSE34471 Heme utilization in the Caenorhabditis elegans hypodermal cells is facilitated by HRG-2

Data table header descriptions
ID_REF
VALUE RMA

Data table
ID_REF VALUE
171720_x_at 8.19723
171721_x_at 8.90892
171722_x_at 10.0719
171723_x_at 4.44299
171724_x_at 6.98942
171725_x_at 12.3759
171726_x_at 7.59088
171727_x_at 6.71533
171728_x_at 8.44735
171729_x_at 9.62621
171730_x_at 9.52915
171731_x_at 8.47121
171732_x_at 8.22594
171733_x_at 7.5023
171734_x_at 12.241
171735_x_at 12.2961
171736_x_at 6.38596
171737_x_at 10.7879
171738_x_at 10.834
171739_x_at 8.87089

Total number of rows: 22625

Table truncated, full table size 409 Kbytes.




Supplementary file Size Download File type/resource
GSM849816_09-30-11_MKrause8_IH_Celegans_8-4uM-Exp2.CEL.gz 3.1 Mb (ftp)(http) CEL
GSM849816_09-30-11_MKrause8_IH_Celegans_8-4uM-Exp2.CHP.gz 5.5 Mb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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