NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM848352 Query DataSets for GSM848352
Status Public on Apr 05, 2012
Title Adult_female_Df(3R)ED7665/+_Df(2L)ED4559/+
Sample type RNA
 
Source name Adult_female_Df(3R)ED7665/+_Df(2L)ED4559/+
Organism Drosophila melanogaster
Characteristics gender: female
age: adult (0-24hr)
genotype/variation: Df(3R)ED7665/+_Df(2L)ED4559/+
Treatment protocol Each sample, containing 15 adult female flies in age 0-24h, were collected and frozen in -70 ̊ C prior to RNA extraction
Growth protocol Flies were cultivated and crossed in vials with potato-yeast-agar medium at 25 ̊ C.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using TRIzol reagent (Invitrogen) followed by a purification using RNeasy kit (Qiagen) according to the instruction by the suppliers.
Label biotin
Label protocol Standard Affymetrix
 
Hybridization protocol Standard Affymetrix
Scan protocol Standard Affymetrix
Description DP37.CEL
Gene expression data from adult females
Data processing Raw data was normalized using RMA (R and Bioconductor).
 
Submission date Dec 13, 2011
Last update date Aug 28, 2018
Contact name Jan Larsson
E-mail(s) [email protected]
Organization name Umea University
Department Molecular Biology
Lab Jan Larsson
Street address Umea University
City Umea
ZIP/Postal code SE-90187
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE34400 Buffering and proteolysis are induced upon segmental haploidy in Drosophila melanogaster.
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1616608_a_at 13.6039382314551
1622892_s_at 7.63078571797612
1622893_at 13.8423400719211
1622894_at 7.01761079178923
1622895_at 8.10305365949098
1622896_at 7.95615847341907
1622897_at 4.51829028516049
1622898_a_at 9.95944855720346
1622899_at 4.07063571903025
1622900_at 3.445485878075
1622901_at 6.89933557444665
1622902_at 8.22663519557716
1622903_s_at 8.35999096486742
1622904_at 5.03080483263033
1622905_at 3.22866215926572
1622906_at 8.41180874286824
1622907_at 8.15358083310424
1622908_a_at 8.1672886220826
1622909_at 9.65738289015723
1622910_at 3.40927765411559

Total number of rows: 18952

Table truncated, full table size 524 Kbytes.




Supplementary file Size Download File type/resource
GSM848352_DP37.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap