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Sample GSM848332 Query DataSets for GSM848332
Status Public on Apr 05, 2012
Title Adult_female_Df(2R)ED1612/+_Df(3R)ED10953/+
Sample type RNA
 
Source name Adult_female_Df(2R)ED1612/+_Df(3R)ED10953/+
Organism Drosophila melanogaster
Characteristics gender: female
age: adult (0-24hr)
genotype/variation: Df(2R)ED1612/+_Df(3R)ED10953/+
Treatment protocol Each sample, containing 15 adult female flies in age 0-24h, were collected and frozen in -70 ̊ C prior to RNA extraction
Growth protocol Flies were cultivated and crossed in vials with potato-yeast-agar medium at 25 ̊ C.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using TRIzol reagent (Invitrogen) followed by a purification using RNeasy kit (Qiagen) according to the instruction by the suppliers.
Label biotin
Label protocol Standard Affymetrix
 
Hybridization protocol Standard Affymetrix
Scan protocol Standard Affymetrix
Description DP15.CEL
Gene expression data from adult females
Data processing Raw data was normalized using RMA (R and Bioconductor).
 
Submission date Dec 13, 2011
Last update date Aug 28, 2018
Contact name Jan Larsson
E-mail(s) [email protected]
Organization name Umea University
Department Molecular Biology
Lab Jan Larsson
Street address Umea University
City Umea
ZIP/Postal code SE-90187
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE34400 Buffering and proteolysis are induced upon segmental haploidy in Drosophila melanogaster.
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1616608_a_at 13.173510471546
1622892_s_at 7.51740595742089
1622893_at 13.6419485268755
1622894_at 8.40914464985741
1622895_at 8.37006673993682
1622896_at 8.60689752189169
1622897_at 4.36241993761858
1622898_a_at 10.1441252338172
1622899_at 3.87588860553719
1622900_at 3.54908008365994
1622901_at 6.27629313720598
1622902_at 7.94165792763073
1622903_s_at 8.32430846920761
1622904_at 4.89951490023358
1622905_at 3.1809613849271
1622906_at 8.32173406697907
1622907_at 8.47985371538357
1622908_a_at 9.15530168136714
1622909_at 9.66660095367794
1622910_at 3.2770283943725

Total number of rows: 18952

Table truncated, full table size 524 Kbytes.




Supplementary file Size Download File type/resource
GSM848332_DP15.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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