NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM848326 Query DataSets for GSM848326
Status Public on Apr 05, 2012
Title Adult_female_Df(2L)ED4559/+_biological_rep_1
Sample type RNA
 
Source name Adult_female_Df(2L)ED4559/+
Organism Drosophila melanogaster
Characteristics gender: female
age: adult (0-24hr)
genotype/variation: Df(2L)ED4559/+
Treatment protocol Each sample, containing 15 adult female flies in age 0-24h, were collected and frozen in -70 ̊ C prior to RNA extraction
Growth protocol Flies were cultivated and crossed in vials with potato-yeast-agar medium at 25 ̊ C.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using TRIzol reagent (Invitrogen) followed by a purification using RNeasy kit (Qiagen) according to the instruction by the suppliers.
Label biotin
Label protocol Standard Affymetrix
 
Hybridization protocol Standard Affymetrix
Scan protocol Standard Affymetrix
Description DP8.CEL
Gene expression data from adult females
Data processing Raw data was normalized using RMA (R and Bioconductor).
 
Submission date Dec 13, 2011
Last update date Aug 28, 2018
Contact name Jan Larsson
E-mail(s) [email protected]
Organization name Umea University
Department Molecular Biology
Lab Jan Larsson
Street address Umea University
City Umea
ZIP/Postal code SE-90187
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE34400 Buffering and proteolysis are induced upon segmental haploidy in Drosophila melanogaster.
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1616608_a_at 13.2304046836055
1622892_s_at 7.25795829777895
1622893_at 13.8009652246036
1622894_at 7.22390595206404
1622895_at 7.77696441734002
1622896_at 8.36852593815123
1622897_at 4.39459103188126
1622898_a_at 10.3022749281029
1622899_at 3.88525002067253
1622900_at 3.33564872954297
1622901_at 6.78984607695595
1622902_at 9.66865555360605
1622903_s_at 8.2947721964131
1622904_at 4.64054039992297
1622905_at 3.00419111228051
1622906_at 8.56261727465615
1622907_at 8.38570223572042
1622908_a_at 8.21408999030845
1622909_at 9.59817520399319
1622910_at 3.33737122348728

Total number of rows: 18952

Table truncated, full table size 524 Kbytes.




Supplementary file Size Download File type/resource
GSM848326_DP8.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap