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GEO accession:
Sample GSM84322
Query DataSets for GSM84322
Status
Public on Nov 18, 2006
Title
R7N 6
Sample type
RNA
Source name
Retina
Organism
Mus musculus
Characteristics
Strain : 100% C57BL/6
Gender: Female
Age: 9 weeks (Moderate stage)
Transgene: Normal ataxin-7
Extracted molecule
total RNA
Label
Biotinylated cRNA
Description
NA
Data processing
MAS 5.0 algorithms - Global data normalization
Submission date
Nov 18, 2005
Last update date
Dec 01, 2005
Contact name
Gretta ABOU-SLEYMANE
E-mail(s)
[email protected]
Phone
00 33 3 88 65 34 13
Organization name
IGBMC
Street address
1 rue Laurent Fries
City
ILLKIRCH
ZIP/Postal code
67 404
Country
France
Platform ID
GPL339
Series (1)
GSE3634
Molecular pathways involved in neuronal degeneration of polyglutamine mouse models
Data table header descriptions
ID_REF
VALUE
MAS 5.0 signal intensity, a measure of transcript abundance
ABS_CALL
MAS 5.0 detection call, a flag that indicates if the transcript was present (P), absent (A) or marginal (M)
DETECTION P-VALUE
p-value that indicates the significance level of the MAS 5.0 detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
47.0
P
0.007620
AFFX-BioB-M_at
84.5
P
0.000169
AFFX-BioB-3_at
34.1
P
0.004484
AFFX-BioC-5_at
129.0
P
0.000225
AFFX-BioC-3_at
81.2
P
0.000110
AFFX-BioDn-5_at
90.6
P
0.000390
AFFX-BioDn-3_at
678.8
P
0.000147
AFFX-CreX-5_at
1199.1
P
0.000044
AFFX-CreX-3_at
2190.6
P
0.000044
AFFX-DapX-5_at
6.5
A
0.131361
AFFX-DapX-M_at
6.6
A
0.313723
AFFX-DapX-3_at
4.8
A
0.860518
AFFX-LysX-5_at
0.9
A
0.737173
AFFX-LysX-M_at
7.6
A
0.574038
AFFX-LysX-3_at
2.7
A
0.262827
AFFX-PheX-5_at
0.4
A
0.891021
AFFX-PheX-M_at
2.6
A
0.824672
AFFX-PheX-3_at
4.0
A
0.514890
AFFX-ThrX-5_at
2.3
A
0.737173
AFFX-ThrX-M_at
5.9
A
0.411380
Total number of rows:
22690
Table truncated, full table size
615 Kbytes
.
Supplementary data files not provided
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