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Sample GSM811197 Query DataSets for GSM811197
Status Public on Feb 15, 2012
Title Keratinocytes_ZNF750i_rep1
Sample type RNA
 
Source name Primary neonatal keratinocytes
Organism Homo sapiens
Characteristics cell type: primary neonatal keratinocytes
treatment: ZNF750 knock down
Treatment protocol siRNA knock down
Growth protocol Keratinocytes were grown in Gibco SFM medium till 100% confluent with addition of 1.2 mM Ca2+ for 3 Days to induce differentiation.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy kits were used to isolate total RNA.
Label biotin
Label protocol Affymetrix 3' IVT Express Kit
 
Hybridization protocol Affymetrix GeneChip Hybridization, Wash, and Stain Kit
Scan protocol Affymetrix GeneChip Scanner 3000 7G
Description replicate 1
Data processing RMA normalization using justRMA package in R 2.11.1
 
Submission date Oct 06, 2011
Last update date Oct 11, 2022
Contact name Douglas Porter
Organization name Stanford
Department Dermatology
Lab Khavari
Street address 269 Campus Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL570
Series (1)
GSE32685 ZNF750 Drives Terminal Epidermal Differentiation via Induction of Klf4

Data table header descriptions
ID_REF
VALUE Normalized value

Data table
ID_REF VALUE
1007_s_at 11.3593319
1053_at 8.225254088
117_at 5.378924172
121_at 8.253482329
1255_g_at 3.530197661
1294_at 5.562045893
1316_at 5.367516674
1320_at 5.384316775
1405_i_at 3.532704365
1431_at 3.776408105
1438_at 7.155967066
1487_at 9.419415984
1494_f_at 5.699573368
1552256_a_at 8.006334966
1552257_a_at 9.203472261
1552258_at 4.417270324
1552261_at 4.312963998
1552263_at 6.983284664
1552264_a_at 7.528231992
1552266_at 3.576902429

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM811197.CEL.gz 4.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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