|
| Status |
Public on Dec 05, 2012 |
| Title |
786-M1A |
| Sample type |
RNA |
| |
|
| Source name |
786-M1A
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: 1st generation metastatic derivative of 786-O renal cell carcinoma cell line
|
| Growth protocol |
Standard tissue culture conditions.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
PrepEase RNA spin kit (USB)
|
| Label |
biotin
|
| Label protocol |
Standard Affymetrix protocol.
|
| |
|
| Hybridization protocol |
Standard Affymetrix protocol.
|
| Scan protocol |
Standard Affymetrix protocol.
|
| Description |
First generation metastatic derivative
786M1A_HG-U133A_2.CEL
|
| Data processing |
GCRMA as implemented in the R-package gcrma using the default settings and custom CDF-file hs133av2hsentrezgcdf version 10.
|
| |
|
| Submission date |
Sep 22, 2011 |
| Last update date |
Dec 05, 2012 |
| Contact name |
Sakari Vanharanta |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Helsinki
|
| Department |
Translational Cancer Medicine Program
|
| Lab |
Vanharanta
|
| Street address |
Haartmaninkatu 8
|
| City |
Helsinki |
| ZIP/Postal code |
00014 |
| Country |
Finland |
| |
|
| Platform ID |
GPL14604 |
| Series (2) |
| GSE32295 |
Gene expression data from the 786-O renal cell carcinoma cell line and its metastatic derivatives. |
| GSE32299 |
Epigenetic expansion of VHL-HIF signal output drives multiorgan metastasis in renal cancer |
|
