GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM789815
Query DataSets for GSM789815
Status
Public on Sep 01, 2011
Title
hip_391_ko_m_9
Sample type
RNA
Source name
Mouse Brain Tissue
Organism
Mus musculus
Characteristics
genotype: ko
region: hip
timepoint: 9 month
gender: M
replicate: 1
Treatment protocol
None
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Qiagen RNAeasy
Label
Biotin
Label protocol
Standard Illumina protocol
Hybridization protocol
Standard Illumina protocol
Scan protocol
Standard Illumina protocol
Description
Hippocampus, KO mice, 9 MO
5388489005_F
Data processing
BeadStudio, quantile normalization
Submission date
Sep 01, 2011
Last update date
Sep 01, 2011
Contact name
Giovanni Coppola
E-mail(s)
[email protected]
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6885
Series (1)
GSE31840
Gene Expression Study in Progranulin-Deficient Mice
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expression levels
Data table
ID_REF
VALUE
ILMN_1248788
6.75227815850267
ILMN_2707227
7.19104749898628
ILMN_2896528
11.4968666421802
ILMN_2721178
9.69264206239867
ILMN_1227723
8.35828907248712
ILMN_3033922
10.4812225185594
ILMN_3092673
12.3679744646371
ILMN_2730714
11.531119369123
ILMN_3162224
10.7895612269004
ILMN_2816356
7.45255934455788
ILMN_2808939
9.94734981526768
ILMN_2634564
8.69572885282228
ILMN_1216623
8.82645714270448
ILMN_1215157
9.00005576474985
ILMN_1228777
7.02724463714668
ILMN_2737647
7.07206777686934
ILMN_1216425
7.0039464258033
ILMN_2734484
9.10488002295554
ILMN_2652961
6.96715174614406
ILMN_2952292
7.16314436698979
Total number of rows:
25697
Table truncated, full table size
749 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
