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GEO accession:
Sample GSM789807
Query DataSets for GSM789807
Status
Public on Sep 01, 2011
Title
ctx_648_ko_m_6
Sample type
RNA
Source name
Mouse Brain Tissue
Organism
Mus musculus
Characteristics
genotype: ko
region: ctx
timepoint: 6 month
gender: M
replicate: 1
Treatment protocol
None
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Qiagen RNAeasy
Label
Biotin
Label protocol
Standard Illumina protocol
Hybridization protocol
Standard Illumina protocol
Scan protocol
Standard Illumina protocol
Description
Cortex, KO mice, 6 MO
5388489004_F
Data processing
BeadStudio, quantile normalization
Submission date
Sep 01, 2011
Last update date
Sep 01, 2011
Contact name
Giovanni Coppola
E-mail(s)
[email protected]
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6885
Series (1)
GSE31840
Gene Expression Study in Progranulin-Deficient Mice
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expression levels
Data table
ID_REF
VALUE
ILMN_1248788
6.94231460199108
ILMN_2707227
7.21297464782351
ILMN_2896528
11.4061079896451
ILMN_2721178
9.57631881758569
ILMN_1227723
8.16746367256202
ILMN_3033922
10.163389379448
ILMN_3092673
12.0371129064948
ILMN_2730714
11.5017378539816
ILMN_3162224
10.7619115727198
ILMN_2816356
7.28625074488904
ILMN_2808939
9.80791908730505
ILMN_2634564
8.75563613277312
ILMN_1216623
9.01411055971458
ILMN_1215157
9.27710380284758
ILMN_1228777
6.6867555481859
ILMN_2737647
7.01702795781888
ILMN_1216425
7.02841249719952
ILMN_2734484
8.94025318274022
ILMN_2652961
6.88372135439801
ILMN_2952292
7.19112138098148
Total number of rows:
25697
Table truncated, full table size
749 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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