GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM789767
Query DataSets for GSM789767
Status
Public on Sep 01, 2011
Title
crb_665_wt_f_6
Sample type
RNA
Source name
Mouse Brain Tissue
Organism
Mus musculus
Characteristics
genotype: wt
region: crb
timepoint: 6 month
gender: F
replicate: 3
Treatment protocol
None
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Qiagen RNAeasy
Label
Biotin
Label protocol
Standard Illumina protocol
Hybridization protocol
Standard Illumina protocol
Scan protocol
Standard Illumina protocol
Description
Cerebellum, WT mice, 6 MO
5406940016_E
Data processing
BeadStudio, quantile normalization
Submission date
Sep 01, 2011
Last update date
Sep 01, 2011
Contact name
Giovanni Coppola
E-mail(s)
[email protected]
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6885
Series (1)
GSE31840
Gene Expression Study in Progranulin-Deficient Mice
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expression levels
Data table
ID_REF
VALUE
ILMN_1248788
7.10276376271408
ILMN_2707227
7.07758266398038
ILMN_2896528
11.2108032979742
ILMN_2721178
9.06603090104258
ILMN_1227723
8.54374684056214
ILMN_3033922
9.53161080011279
ILMN_3092673
12.1072913763339
ILMN_2730714
11.4254674171676
ILMN_3162224
10.3500572774341
ILMN_2816356
7.70167504021418
ILMN_2808939
10.6025920562483
ILMN_2634564
8.57595002640759
ILMN_1216623
9.07322481229825
ILMN_1215157
9.27487513067845
ILMN_1228777
6.84446868770367
ILMN_2737647
7.01352071028132
ILMN_1216425
6.77657782885502
ILMN_2734484
9.5677927267673
ILMN_2652961
6.77469020635512
ILMN_2952292
6.95822114191684
Total number of rows:
25697
Table truncated, full table size
749 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
