GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM789759
Query DataSets for GSM789759
Status
Public on Sep 01, 2011
Title
hip_304_het_f_2
Sample type
RNA
Source name
Mouse Brain Tissue
Organism
Mus musculus
Characteristics
genotype: het
region: hip
timepoint: 2 month
gender: F
replicate: 2
Treatment protocol
None
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Qiagen RNAeasy
Label
Biotin
Label protocol
Standard Illumina protocol
Hybridization protocol
Standard Illumina protocol
Scan protocol
Standard Illumina protocol
Description
Hippocampus, Heterozygous mice, 2 MO
4697095041_E
Data processing
BeadStudio, quantile normalization
Submission date
Sep 01, 2011
Last update date
Sep 01, 2011
Contact name
Giovanni Coppola
E-mail(s)
[email protected]
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6885
Series (1)
GSE31840
Gene Expression Study in Progranulin-Deficient Mice
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expression levels
Data table
ID_REF
VALUE
ILMN_1248788
7.13397539267326
ILMN_2707227
6.98998652058817
ILMN_2896528
11.7862815647022
ILMN_2721178
9.77612284732678
ILMN_1227723
9.02793261678382
ILMN_3033922
9.70356529713451
ILMN_3092673
12.1709963173146
ILMN_2730714
11.6371491524527
ILMN_3162224
9.81162236506138
ILMN_2816356
7.30982628703551
ILMN_2808939
9.74457503369234
ILMN_2634564
8.63663236395807
ILMN_1216623
8.86468733584177
ILMN_1215157
9.27527475353999
ILMN_1228777
7.06143771601659
ILMN_2737647
7.35404139463595
ILMN_1216425
6.95760390549039
ILMN_2734484
8.439395318341
ILMN_2652961
6.78814536045756
ILMN_2952292
7.59145944300825
Total number of rows:
25697
Table truncated, full table size
749 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
