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GEO accession:
Sample GSM789748
Query DataSets for GSM789748
Status
Public on Sep 01, 2011
Title
ctx_263_ko_m_2
Sample type
RNA
Source name
Mouse Brain Tissue
Organism
Mus musculus
Characteristics
genotype: ko
region: ctx
timepoint: 2 month
gender: M
replicate: 5
Treatment protocol
None
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Qiagen RNAeasy
Label
Biotin
Label protocol
Standard Illumina protocol
Hybridization protocol
Standard Illumina protocol
Scan protocol
Standard Illumina protocol
Description
Cortex, KO mice, 2 MO
4697095040_B
Data processing
BeadStudio, quantile normalization
Submission date
Sep 01, 2011
Last update date
Sep 01, 2011
Contact name
Giovanni Coppola
E-mail(s)
[email protected]
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6885
Series (1)
GSE31840
Gene Expression Study in Progranulin-Deficient Mice
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expression levels
Data table
ID_REF
VALUE
ILMN_1248788
7.14209281092974
ILMN_2707227
7.15394465651435
ILMN_2896528
11.6206830947484
ILMN_2721178
9.56984133540485
ILMN_1227723
8.51614275931306
ILMN_3033922
9.55056548644489
ILMN_3092673
11.9004198784138
ILMN_2730714
11.746877089056
ILMN_3162224
10.2772412069928
ILMN_2816356
7.42594467811667
ILMN_2808939
9.86254785449173
ILMN_2634564
8.90409591090555
ILMN_1216623
8.99534484094474
ILMN_1215157
9.38595184719123
ILMN_1228777
6.79035358117601
ILMN_2737647
7.19019279059528
ILMN_1216425
6.98728117647293
ILMN_2734484
8.52553402661155
ILMN_2652961
6.76526704380609
ILMN_2952292
7.17683953363231
Total number of rows:
25697
Table truncated, full table size
749 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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