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Sample GSM77092 Query DataSets for GSM77092
Status Public on Dec 06, 2005
Title Human Hair Follicle Sub-Bulge#1
Sample type RNA
 
Source name Human Scalp
Organism Homo sapiens
Characteristics Transverse frozen sections of human scalp were made. After precisely defining the different anatomical locations of individual hair follicles, laser capture microdissection was used to isolate the desired hair follicle cells.
Extracted molecule total RNA
Extraction protocol Picopure RNA isolation kit (Arcturas) and DNAse digestion (Qiagen)

Quality assessed by Agilent 2100 bioanalyzer and a RNA 6000 Pico LabChip kit (Agilent)
Label Biotin
Label protocol T7-primer based two round linear RNA amplification protocol: "Genechip Eukaryotic Small Sample Target Labeling Assay Version II" (equivalent to the GeneChip Two-Cycle cDNA Synthesis kit, Affymetrix)
 
Description Affymetrix protocol
Data processing MASv5.0
 
Submission date Oct 06, 2005
Last update date Oct 06, 2005
Contact name Jonathan Vogel
E-mail(s) [email protected]
Phone 301 496-9002
Organization name National Cancer Institute; NIH
Department Dermatology
Street address Bldg. 10 / Room 12N260
City Bethesda
State/province MD
ZIP/Postal code 20892-1908
Country USA
 
Platform ID GPL96
Series (1)
GSE3419 Characterization and isolation of stem cell enriched human hair follicle bulge cells

Data table header descriptions
ID_REF
VALUE Signal Intensity
ABS_CALL Present or Absent call by MASv5.0

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 475.6 P
AFFX-BioB-M_at 938 P
AFFX-BioB-3_at 514.2 P
AFFX-BioC-5_at 1190.9 P
AFFX-BioC-3_at 1049.6 P
AFFX-BioDn-5_at 532.7 P
AFFX-BioDn-3_at 2659.9 P
AFFX-CreX-5_at 5760.2 P
AFFX-CreX-3_at 7601.4 P
AFFX-DapX-5_at 10.8 A
AFFX-DapX-M_at 14.8 A
AFFX-DapX-3_at 7.2 A
AFFX-LysX-5_at 1 A
AFFX-LysX-M_at 7.1 A
AFFX-LysX-3_at 1 A
AFFX-PheX-5_at 2.4 A
AFFX-PheX-M_at 2.6 A
AFFX-PheX-3_at 4.1 A
AFFX-ThrX-5_at 6.2 A
AFFX-ThrX-M_at 11.5 A

Total number of rows: 22283

Table truncated, full table size 390 Kbytes.




Supplementary file Size Download File type/resource
GSM77092.CEL.gz 3.4 Mb (ftp)(http) CEL

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