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Sample GSM738166 Query DataSets for GSM738166
Status Public on Aug 01, 2011
Title muscle_control_rep8
Sample type RNA
 
Source name muscle
Organism Mus musculus
Characteristics age: 423d
Sex: M
strain: A/J
tumor: control
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol Reagent, followed by Qiagen DNAse1 treatment according to manufacturer's protocol. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description GES07_0177
Data processing log2-transformed Illumina average intensity data followed by quantile normalization
 
Submission date Jun 07, 2011
Last update date Aug 01, 2011
Contact name Roger Sher
E-mail(s) [email protected]
Phone 207-288-6503
Fax 207-288-6077
Organization name The Jackson Laboratory
Street address 600 Main Street
City Bar Harbor
ZIP/Postal code 04609
Country USA
 
Platform ID GPL6481
Series (1)
GSE29775 Rhabdomyosarcomas in aging A/J mice

Data table header descriptions
ID_REF
VALUE quantile normalized log2-transformed Illumina average intensity data
Detection Pval

Data table
ID_REF VALUE Detection Pval
10243 7.60140166 0.06550218
10280 7.3393776 0.1628197
10575 8.49606819 0.00436681
20048 7.31767525 0.1790393
20296 14.1114704 0
20343 7.26385975 0.2170929
20373 6.97968844 0.5327511
20431 13.7130521 0
50014 7.10648271 0.3537118
50017 7.39148583 0.135995
50019 13.1841598 0
50020 7.75490802 0.03618216
50022 6.83456035 0.8296943
50025 6.90826807 0.691204
50026 6.97046927 0.5520898
50035 6.66527268 0.9725515
50037 8.35706058 0.0062383
50039 11.344448 0
50040 8.72118647 0.00311915
50041 10.4264382 0

Total number of rows: 46643

Table truncated, full table size 1296 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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