NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM732839 Query DataSets for GSM732839
Status Public on Jun 24, 2011
Title 22tl MAP
Sample type RNA
 
Source name Fresh-frozen xenograft, human melanoma cells into Mus musculus, MAP
Organism Homo sapiens
Characteristics cell type: fresh-frozen xenograft, human melanoma cells into Mus musculus
Extracted molecule total RNA
Extraction protocol RNeasy kit (Qiagen)
Label biotin
Label protocol MessageAmp™ Premier RNA Amplification Kit
 
Hybridization protocol Affymetrix suggested protocol for Affymetrix GeneChip hybridization oven 645 and Fluidics Station 450
Scan protocol Affymetrix suggested protocol for Affymetrix GeneChip Scanner 7G
Description Xenograft_Fresh-frozen_MAP
Data processing Generated MAS5 data using the Affymetrix Expression Console version 1.1 software
 
Submission date May 27, 2011
Last update date Jun 24, 2011
Contact name Holly Kloos Dressman
E-mail(s) [email protected]
Organization name Duke University Medical Center
Department Institute for Genome Sciences and Policy
Street address 101 Science Drive
City Durham
State/province NC
ZIP/Postal code 27708
Country USA
 
Platform ID GPL571
Series (1)
GSE29598 A Methodology for Utilization of Predictive Genomic Signatures in FFPE Samples

Data table header descriptions
ID_REF
VALUE MAS5 signal

Data table
ID_REF VALUE
1007_s_at 629.1388
1053_at 540.9736
117_at 55.10519
121_at 275.7483
1255_g_at 9.470933
1294_at 111.315
1316_at 230.682
1320_at 25.28611
1405_i_at 2.658079
1431_at 6.289124
1438_at 25.18258
1487_at 495.1889
1494_f_at 38.50447
1598_g_at 269.2122
160020_at 1477.346
1729_at 195.6753
1773_at 127.349
177_at 69.46763
179_at 136.8872
1861_at 135.4401

Total number of rows: 22277

Table truncated, full table size 431 Kbytes.




Supplementary file Size Download File type/resource
GSM732839_1975_4197_22153_22tl_HG-U133A+2.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap