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Sample GSM723155 Query DataSets for GSM723155
Status Public on Sep 16, 2012
Title NSCLC 5
Sample type RNA
 
Source name lung
Organism Homo sapiens
Characteristics gender: male
disease state: NSCLC
nsclc type: adenocarcinoma
tissue: cancer
tnm: /2/2/0/
Treatment protocol none
Growth protocol none
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with 1% agrose electrophoresis .
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description SAMPLE 9
replicate 1
Data processing The data were normalised using average normalisation with Illumina Genomestudio software
 
Submission date May 12, 2011
Last update date May 16, 2014
Contact name lina ma
E-mail(s) [email protected]
Organization name Zhoushan Hospital
Street address Renmin North Road No.238
City Zhoushan
ZIP/Postal code 316004
Country China
 
Platform ID GPL8179
Series (2)
GSE29248 Genome-wide analysis of microRNA expression in Non-small Cell Lung Cancer
GSE29250 An Integrated Analysis of miRNA and mRNA Expressions of Non-small Cell Lung Cancer

Data table header descriptions
ID_REF
VALUE average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_3167304 -45.56604 0.8215831
ILMN_3168038 495.0409 0.006490782
ILMN_3167890 5273.69 3.68E-38
ILMN_3167526 17.70309 0.6994555
ILMN_3167209 -45.56604 0.8215831
ILMN_3168219 365.0221 0.04793755
ILMN_3167464 504.0909 0.005522272
ILMN_3167213 -31.53707 0.7975878
ILMN_3167057 1120.669 6.60E-11
ILMN_3168313 10.96348 0.7140628
ILMN_3166972 37.2337 0.655347
ILMN_3168149 418.5132 0.02263317
ILMN_3168527 -21.28373 0.7788879
ILMN_3167562 -39.58115 0.8115741
ILMN_3168099 1039.604 1.67E-09
ILMN_3168017 465.7886 0.01072428
ILMN_3167545 -6.461716 0.7501836
ILMN_3167951 1695.273 4.91E-24
ILMN_3167172 926.3792 9.90E-08
ILMN_3167994 693.3102 9.45E-05

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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