NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM69780 Query DataSets for GSM69780
Status Public on Dec 31, 2005
Title HNF4 CONTROL_277
Sample type RNA
 
Source name HNF4loxp/+villin cre
Organism Mus musculus
Characteristics strain: HNF4LoxP/+ Villin Cre
age: 1 month
tissue: small intestine
sex: female
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini
Label Biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description HNF4 control small intestine
Data processing D-Chip, PM/MM model with defaults
 
Submission date Aug 12, 2005
Last update date Nov 18, 2010
Contact name Stephen A Duncan
E-mail(s) [email protected]
Phone 843-792-9104
Organization name Medical University South Carolina
Department Regenerative Medicine and Cell Biology
Lab Duncan Lab
Street address 173 Ashley Avenue, BSB 6th Floor, Room 657A
City Charleston
State/province SC
ZIP/Postal code 29425
Country USA
 
Platform ID GPL339
Series (1)
GSE3124 HNF4 small intestine knockout

Data table header descriptions
ID_REF
VALUE D-CHIP ANALYSIS
ABS_CALL MAS

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 129.852 P
AFFX-BioB-M_at 114.451 P
AFFX-BioB-3_at 112.154 P
AFFX-BioC-5_at 250.261 P
AFFX-BioC-3_at 355.159 P
AFFX-BioDn-5_at 425.881 P
AFFX-BioDn-3_at 1044.03 P
AFFX-CreX-5_at 3251.51 P
AFFX-CreX-3_at 3914.47 P
AFFX-DapX-5_at 205.281 P
AFFX-DapX-M_at 255.561 P
AFFX-DapX-3_at 263.303 P
AFFX-LysX-5_at 17.3681 P
AFFX-LysX-M_at 44.5592 A
AFFX-LysX-3_at 47.9947 P
AFFX-PheX-5_at 30.553 P
AFFX-PheX-M_at 68.907 P
AFFX-PheX-3_at 60.5664 P
AFFX-ThrX-5_at 33.9226 P
AFFX-ThrX-M_at 61.552 P

Total number of rows: 22690

Table truncated, full table size 477 Kbytes.




Supplementary file Size Download File type/resource
GSM69780.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap