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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 01, 2011 |
| Title |
SA_292 |
| Sample type |
RNA |
| |
|
| Source name |
Severe asthma
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: white blood cells
age: 10.6
Sex: male
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Ambion RiboPure blood extraction kit including DNAse treatment
|
| Label |
biotin
|
| Label protocol |
Acccording to affymetrix standard proceedures
|
| |
|
| Hybridization protocol |
Acccording to affymetrix standard proceedures
|
| Scan protocol |
Acccording to affymetrix standard proceedures
|
| Description |
Patient with severe, therapy resistent asthma
|
| Data processing |
affy package, justRMA, limma (Bioconductor)
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| |
|
| Submission date |
Feb 02, 2011 |
| Last update date |
Dec 01, 2011 |
| Contact name |
Christina Orsmark Pietras |
| Organization name |
Karolinska Institutet
|
| Street address |
Hälsovägen 7-9
|
| City |
Stockholm |
| ZIP/Postal code |
11767 |
| Country |
Sweden |
| |
|
| Platform ID |
GPL6244 |
| Series (1) |
| GSE27011 |
Expression data from severe asthmatics, mild asthmatics and healthy controls |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Pre processed, normalized, log2 expression values |
| Data table |
| ID_REF |
VALUE |
| 7896746 |
8.53028024298363 |
| 7896756 |
5.20982920028405 |
| 7896759 |
6.93853139352323 |
| 7896761 |
6.5262903990414 |
| 7896779 |
7.02570087349182 |
| 7896798 |
7.13661926124793 |
| 7896817 |
6.78667948837548 |
| 7896822 |
6.38524182544792 |
| 7896859 |
5.88788526683553 |
| 7896861 |
3.41088241499947 |
| 7896863 |
5.56079455418462 |
| 7896865 |
7.47245866399325 |
| 7896878 |
7.25507993543973 |
| 7896882 |
6.45122578504488 |
| 7896908 |
7.00082659086295 |
| 7896917 |
6.90871690962183 |
| 7896921 |
7.03075961072528 |
| 7896929 |
6.6631954335313 |
| 7896937 |
5.29511424904592 |
| 7896952 |
7.31185878203824 |
Total number of rows: 28231
Table truncated, full table size 685 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM665435.CEL.gz |
4.0 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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