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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 01, 2011 |
| Title |
SA_201 |
| Sample type |
RNA |
| |
|
| Source name |
Severe asthma
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: white blood cells
age: 16.94
Sex: female
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Ambion RiboPure blood extraction kit including DNAse treatment
|
| Label |
biotin
|
| Label protocol |
Acccording to affymetrix standard proceedures
|
| |
|
| Hybridization protocol |
Acccording to affymetrix standard proceedures
|
| Scan protocol |
Acccording to affymetrix standard proceedures
|
| Description |
Patient with severe, therapy resistent asthma
|
| Data processing |
affy package, justRMA, limma (Bioconductor)
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| |
|
| Submission date |
Feb 02, 2011 |
| Last update date |
Dec 01, 2011 |
| Contact name |
Christina Orsmark Pietras |
| Organization name |
Karolinska Institutet
|
| Street address |
Hälsovägen 7-9
|
| City |
Stockholm |
| ZIP/Postal code |
11767 |
| Country |
Sweden |
| |
|
| Platform ID |
GPL6244 |
| Series (1) |
| GSE27011 |
Expression data from severe asthmatics, mild asthmatics and healthy controls |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Pre processed, normalized, log2 expression values |
| Data table |
| ID_REF |
VALUE |
| 7896746 |
8.46614068878479 |
| 7896756 |
4.96690829836056 |
| 7896759 |
6.80449135116228 |
| 7896761 |
6.39033049285187 |
| 7896779 |
7.00203367360973 |
| 7896798 |
7.13987795634546 |
| 7896817 |
6.74139108796734 |
| 7896822 |
6.24520529290583 |
| 7896859 |
5.65337460689933 |
| 7896861 |
3.96475112442859 |
| 7896863 |
5.66184505053623 |
| 7896865 |
7.40121379803175 |
| 7896878 |
7.32250240381423 |
| 7896882 |
6.35981739823871 |
| 7896908 |
7.10665854384145 |
| 7896917 |
6.63901034533553 |
| 7896921 |
6.89298825991767 |
| 7896929 |
6.68027686373606 |
| 7896937 |
5.37735165839688 |
| 7896952 |
7.27662334022265 |
Total number of rows: 28231
Table truncated, full table size 685 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM665426.CEL.gz |
4.0 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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