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Sample GSM65135 Query DataSets for GSM65135
Status Public on Mar 20, 2006
Title EVcontrol2_B
Sample type RNA
 
Source name HEK293 cell line
Organism Homo sapiens
Characteristics stably transfected with empty vector (pTRE2-Hyg)
Extracted molecule total RNA
Extraction protocol accroding to manufacture's protocol (Affymetrix)
Label biotin
Label protocol accroding to manufacture's protocol (Affymetrix)
 
Hybridization protocol accroding to manufacture's protocol (Affymetrix)
Scan protocol accroding to manufacture's protocol (Affymetrix)
Description stably transfected with empty vector (pTRE2-Hyg)
Data processing RMA normalization, Permutation and ANOVA
 
Submission date Jul 21, 2005
Last update date Jan 20, 2009
Contact name James Patrick Bridges
E-mail(s) [email protected]
Fax 513-636-7868
Organization name Cincinnati Children's Hospital Medical Center
Department Pulmonary Biology
Lab Weaver
Street address 3333 Burnet Avenue
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL97
Series (1)
GSE2980 Constitutive expression of misfolded surfactant protein C

Data table header descriptions
ID_REF
VALUE Affymetrix calculated signal intensity
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix calculated detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1616.2 P 0.006871
AFFX-BioB-M_at 3560.6 P 0.000258
AFFX-BioB-3_at 1208.6 P 0.002275
AFFX-BioC-5_at 5347.9 P 0.000169
AFFX-BioC-3_at 3478 P 0.000195
AFFX-BioDn-5_at 4625.3 P 0.000127
AFFX-BioDn-3_at 25047 P 0.000258
AFFX-CreX-5_at 42471.7 P 0.000044
AFFX-CreX-3_at 76924 P 0.000044
AFFX-DapX-5_at 54.9 A 0.39692
AFFX-DapX-M_at 288.4 A 0.327079
AFFX-DapX-3_at 29.2 A 0.949771
AFFX-LysX-5_at 76.5 A 0.51489
AFFX-LysX-M_at 421.6 A 0.544587
AFFX-LysX-3_at 98.7 A 0.368438
AFFX-PheX-5_at 24.1 A 0.963431
AFFX-PheX-M_at 29.8 A 0.910522
AFFX-PheX-3_at 475.5 A 0.205732
AFFX-ThrX-5_at 26.3 A 0.945787
AFFX-ThrX-M_at 34.8 A 0.760937

Total number of rows: 22645

Table truncated, full table size 601 Kbytes.




Supplementary file Size Download File type/resource
GSM65135.CEL.gz 3.3 Mb (ftp)(http) CEL

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