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GEO accession:
Sample GSM64992
Query DataSets for GSM64992
Status
Public on Dec 21, 2005
Title
Bc_Mock_IFNy_2
Sample type
RNA
Source name
Macrophages
Organism
Mus musculus
Characteristics
BALB/c BMDM stimulated with 50 IU/ml IFN-g overnight
Extracted molecule
total RNA
Extraction protocol
Standard TRIzol
Label
biotin
Label protocol
Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
BALB/c BMDM naive
Data processing
Affymetrix Microarray Suite version 5.0, dchip PM-MM Difference Model
Submission date
Jul 21, 2005
Last update date
Dec 21, 2005
Contact name
Reinhard Hoffmann
E-mail(s)
[email protected]
Phone
+49-89-4140-4155
Organization name
Institute for medical microbiology
Street address
Trogerstr. 30
City
Munich
ZIP/Postal code
81675
Country
Germany
Platform ID
GPL339
Series (1)
GSE2973
Mouse BMDM Yersinia infection
Data table header descriptions
ID_REF
VALUE
dchip PM-MM MBEV
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
1415670_at
996.307
P
0.000244
1415671_at
2480.69
P
0.000244
1415672_at
2705
P
0.000244
1415673_at
330.887
P
0.001221
1415674_a_at
873.769
P
0.000244
1415675_at
1098.17
P
0.000244
1415676_a_at
2198.55
P
0.000244
1415677_at
530.729
P
0.00415
1415678_at
1357.13
P
0.000732
1415679_at
2551.82
P
0.000244
1415680_at
1143.29
P
0.000732
1415681_at
845.798
P
0.000244
1415682_at
388.815
P
0.001953
1415683_at
3234.7
P
0.000244
1415684_at
792.214
P
0.000244
1415685_at
331.876
P
0.000244
1415686_at
1755.63
P
0.000244
1415687_a_at
9847.07
P
0.000244
1415688_at
1458.8
P
0.000244
1415689_s_at
797.296
P
0.000732
Total number of rows:
22690
Table truncated, full table size
672 Kbytes
.
Supplementary data files not provided
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