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Sample GSM649485 Query DataSets for GSM649485
Status Public on Jan 06, 2011
Title B7_4h-C2
Sample type RNA
 
Source name Sensitive control
Organism Homo sapiens
Characteristics cell type: tumor breast
cell line: MCF7
Extracted molecule total RNA
Extraction protocol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Data processing The data were analyzed with dchip with default parameters.
 
Submission date Jan 05, 2011
Last update date Jan 06, 2011
Contact name Ross Levine
Organization name MSKCC
Street address RRL
City Manhattan
State/province NY
ZIP/Postal code 10023
Country USA
 
Platform ID GPL570
Series (1)
GSE26459 High-throughput ectopic expression screen for tamoxifen resistance

Data table header descriptions
ID_REF
VALUE dChip signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 542.505
AFFX-BioB-M_at 733.59
AFFX-BioB-3_at 673.348
AFFX-BioC-5_at 460.509
AFFX-BioC-3_at 558.976
AFFX-BioDn-5_at 2651.345
AFFX-BioDn-3_at 7538.016
AFFX-CreX-5_at 12070.659
AFFX-CreX-3_at 10333.808
AFFX-DapX-5_at 17.81
AFFX-DapX-M_at 10.806
AFFX-DapX-3_at 4.548
AFFX-LysX-5_at 7.845
AFFX-LysX-M_at 11.273
AFFX-LysX-3_at 10.944
AFFX-PheX-5_at 9.969
AFFX-PheX-M_at 6.175
AFFX-PheX-3_at 36.508
AFFX-ThrX-5_at 10.613
AFFX-ThrX-M_at 5.945

Total number of rows: 54675

Table truncated, full table size 933 Kbytes.




Supplementary file Size Download File type/resource
GSM649485.CEL.gz 4.3 Mb (ftp)(http) CEL
GSM649485.EXP.gz 507 b (ftp)(http) EXP
Processed data included within Sample table

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