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Sample GSM641880 Query DataSets for GSM641880
Status Public on Feb 16, 2011
Title untreated NOD.RAG 1
Sample type RNA
 
Source name pancreatic islets of Langerhans, NOD.RAG-/- strain, untreated
Organism Mus musculus
Characteristics genotype/variation: RAG-/-
strain: NOD
organ: Pancreas
Extracted molecule total RNA
Extraction protocol Ambion RNAqeuous Micro Kit
Label Biotin
Label protocol Affymetrix® GeneChip® WT Sense Target Labeling
 
Hybridization protocol Affymetrix GeneChip® Fluidics Station 450
Scan protocol Affymetrix GeneChip® Scanner 3000 7G, GCOS
Data processing GCOS, Expression Console, and DNAStar Arraystar 4.0
affymetrix-algorithm-name = RMA
affymetrix-algorithm-version = 1.0
affymetrix-algorithm-param-Background correction method = RMA Background Correction
affymetrix-algorithm-param-Normalization method = Quantile
affymetrix-algorithm-param-Summarization method = Median polish
 
Submission date Dec 17, 2010
Last update date Feb 16, 2011
Contact name Emil Unanue
E-mail(s) [email protected]
Organization name Washington University School of Medicine
Department Pathology and Immunology
Street address 660 S Euclid Ave Box 8118
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL6246
Series (1)
GSE26147 Examination of inflammatory transcripts during a transfer model of type I diabetes.

Data table header descriptions
ID_REF
VALUE normalized data

Data table
ID_REF VALUE
10338001 5405.54
10338002 124.062
10338003 1209.94
10338004 487.669
10338005 3.14855
10338006 4.15653
10338007 6.72693
10338008 18.6764
10338009 715.08
10338010 3.20905
10338011 84.2366
10338012 3.60263
10338013 2.80181
10338014 2.95995
10338015 2.88138
10338016 366.255
10338017 10156
10338018 191.323
10338019 57.2698
10338020 693.535

Total number of rows: 35556

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM641880.CEL.gz 4.1 Mb (ftp)(http) CEL
GSM641880.chp.gz 219.0 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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