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Sample GSM634694 Query DataSets for GSM634694
Status Public on Mar 16, 2011
Title Lonely 5412581024_G
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics lonely: 1
age: 52
female: 0
black: 1
hispanic: 0
married: 1
logincome: 11.91839057
bmi: 33.0842514
granpct: 48
lymphpct: 36
monopct: 12
Extracted molecule total RNA
Extraction protocol Human peripheral blood leukocytes were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina beadarray probe synthesis for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
 
Hybridization protocol Standard Illumina beadarray hybridization protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Scan protocol Standard Illumina beadarray scan protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Description 5412581024_G.AVG_Signal
Data processing Gene expression values derived from Illumina GenomeStudio software.
 
Submission date Dec 03, 2010
Last update date May 07, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL6883
Series (1)
GSE25837 Differential gene expression in circulating leukocytes from chronically lonely individuals

Data table header descriptions
ID_REF
VALUE Quantile normalized expression estimates are reported in the Matrix file. Data were subsequently log2-transformed for analysis

Data table
ID_REF VALUE
ILMN_1809034 288.085
ILMN_1660305 869.299
ILMN_1762337 139.843
ILMN_2055271 187.21
ILMN_1814316 164.359
ILMN_1745607 155.453
ILMN_2136495 161.641
ILMN_2295559 155.138
ILMN_1735045 163.373
ILMN_1680754 202.727
ILMN_1675204 164.842
ILMN_1755321 303.417
ILMN_1698554 397.359
ILMN_1760414 133.57
ILMN_2061446 555.299
ILMN_1752884 153.539
ILMN_1809959 153.565
ILMN_1689211 169.744
ILMN_1653165 602.579
ILMN_1729835 129.748

Total number of rows: 18630

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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