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Sample GSM634688 Query DataSets for GSM634688
Status Public on Mar 16, 2011
Title Lonely 5392306037_A
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics lonely: 1
age: 53
female: 1
black: 1
hispanic: 0
married: 1
logincome: 11.37939407
bmi: 29.33092499
granpct: 58
lymphpct: 29
monopct: 11
Extracted molecule total RNA
Extraction protocol Human peripheral blood leukocytes were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina beadarray probe synthesis for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
 
Hybridization protocol Standard Illumina beadarray hybridization protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Scan protocol Standard Illumina beadarray scan protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Description 5392306037_A.AVG_Signal
Data processing Gene expression values derived from Illumina GenomeStudio software.
 
Submission date Dec 03, 2010
Last update date May 07, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL6883
Series (1)
GSE25837 Differential gene expression in circulating leukocytes from chronically lonely individuals

Data table header descriptions
ID_REF
VALUE Quantile normalized expression estimates are reported in the Matrix file. Data were subsequently log2-transformed for analysis

Data table
ID_REF VALUE
ILMN_1809034 290.742
ILMN_1660305 937.906
ILMN_1762337 162.561
ILMN_2055271 173.538
ILMN_1814316 178.76
ILMN_1745607 149.867
ILMN_2136495 165.3
ILMN_2295559 135.434
ILMN_1735045 146.131
ILMN_1680754 168.627
ILMN_1675204 164.399
ILMN_1755321 254.587
ILMN_1698554 365.967
ILMN_1760414 183.51
ILMN_2061446 341.426
ILMN_1752884 141.907
ILMN_1809959 167.63
ILMN_1689211 152.367
ILMN_1653165 517.152
ILMN_1729835 140.494

Total number of rows: 18630

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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