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Sample GSM634679 Query DataSets for GSM634679
Status Public on Mar 16, 2011
Title Lonely 5412581075_E
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics lonely: 1
age: 55
female: 1
black: 0
hispanic: 0
married: 1
logincome: 11.04292184
bmi: 34.53892517
granpct: 70
lymphpct: 22
monopct: 6
Extracted molecule total RNA
Extraction protocol Human peripheral blood leukocytes were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina beadarray probe synthesis for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
 
Hybridization protocol Standard Illumina beadarray hybridization protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Scan protocol Standard Illumina beadarray scan protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Description 5412581075_E.AVG_Signal
Data processing Gene expression values derived from Illumina GenomeStudio software.
 
Submission date Dec 03, 2010
Last update date May 07, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL6883
Series (1)
GSE25837 Differential gene expression in circulating leukocytes from chronically lonely individuals

Data table header descriptions
ID_REF
VALUE Quantile normalized expression estimates are reported in the Matrix file. Data were subsequently log2-transformed for analysis

Data table
ID_REF VALUE
ILMN_1809034 334.942
ILMN_1660305 1008.882
ILMN_1762337 144.685
ILMN_2055271 196.25
ILMN_1814316 164.168
ILMN_1745607 146.166
ILMN_2136495 165.049
ILMN_2295559 149.672
ILMN_1735045 143.422
ILMN_1680754 186.762
ILMN_1675204 165.279
ILMN_1755321 313.419
ILMN_1698554 308.717
ILMN_1760414 144.549
ILMN_2061446 396.115
ILMN_1752884 149.704
ILMN_1809959 149.54
ILMN_1689211 181.615
ILMN_1653165 628.056
ILMN_1729835 134.611

Total number of rows: 18630

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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