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Sample GSM634656 Query DataSets for GSM634656
Status Public on Mar 16, 2011
Title NonLonely 5392306037_D
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics lonely: 0
age: 55
female: 1
black: 1
hispanic: 0
married: 1
logincome: 11.91839057
bmi: 28.5214119
granpct: 36
lymphpct: 50
monopct: 9
Extracted molecule total RNA
Extraction protocol Human peripheral blood leukocytes were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina beadarray probe synthesis for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
 
Hybridization protocol Standard Illumina beadarray hybridization protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Scan protocol Standard Illumina beadarray scan protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Description 5392306037_D.AVG_Signal
Data processing Gene expression values derived from Illumina GenomeStudio software.
 
Submission date Dec 03, 2010
Last update date May 07, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL6883
Series (1)
GSE25837 Differential gene expression in circulating leukocytes from chronically lonely individuals

Data table header descriptions
ID_REF
VALUE Quantile normalized expression estimates are reported in the Matrix file. Data were subsequently log2-transformed for analysis

Data table
ID_REF VALUE
ILMN_1809034 223.179
ILMN_1660305 808.59
ILMN_1762337 166.628
ILMN_2055271 215.299
ILMN_1814316 162.859
ILMN_1745607 146.032
ILMN_2136495 130.166
ILMN_2295559 143.14
ILMN_1735045 181.621
ILMN_1680754 151.824
ILMN_1675204 157.98
ILMN_1755321 240.372
ILMN_1698554 383.341
ILMN_1760414 186.6
ILMN_2061446 335.401
ILMN_1752884 145.106
ILMN_1809959 164.223
ILMN_1689211 200.322
ILMN_1653165 460.447
ILMN_1729835 141.569

Total number of rows: 18630

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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