NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM634649 Query DataSets for GSM634649
Status Public on Mar 16, 2011
Title Lonely 5412581077_A
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics lonely: 1
age: 60
female: 1
black: 1
hispanic: 0
married: 0
logincome: 10.71441777
bmi: 21.44435501
granpct: 47
lymphpct: 43
monopct: 8
Extracted molecule total RNA
Extraction protocol Human peripheral blood leukocytes were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina beadarray probe synthesis for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
 
Hybridization protocol Standard Illumina beadarray hybridization protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Scan protocol Standard Illumina beadarray scan protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Description 5412581077_A.AVG_Signal
Data processing Gene expression values derived from Illumina GenomeStudio software.
 
Submission date Dec 03, 2010
Last update date May 07, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL6883
Series (1)
GSE25837 Differential gene expression in circulating leukocytes from chronically lonely individuals

Data table header descriptions
ID_REF
VALUE Quantile normalized expression estimates are reported in the Matrix file. Data were subsequently log2-transformed for analysis

Data table
ID_REF VALUE
ILMN_1809034 258.518
ILMN_1660305 972.599
ILMN_1762337 155.17
ILMN_2055271 168.289
ILMN_1814316 157.934
ILMN_1745607 142.44
ILMN_2136495 127.659
ILMN_2295559 148.998
ILMN_1735045 161.672
ILMN_1680754 180.041
ILMN_1675204 156.671
ILMN_1755321 257.25
ILMN_1698554 324.479
ILMN_1760414 152.847
ILMN_2061446 460.983
ILMN_1752884 147.102
ILMN_1809959 165.43
ILMN_1689211 158.176
ILMN_1653165 570.91
ILMN_1729835 127.766

Total number of rows: 18630

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap