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Status
Public on Jun 20, 2005
Title
BM1
Sample type
RNA
Source name
Bone marrow tissue from WT C57BL/6 male mice
Organism
Mus musculus Characteristics
Strain: C57BL/6
Extracted molecule
total RNA
Label
biotin
Description
full description of sample found in Elena M. Comelli, Steven R. Head, Tim Gilmartin, Thomas Whisenant, Stuart M. Haslam, Simon J. North, Nyet-Kui Wong, Takashi Kudo, Hisashi Narimatsu, Jeffrey D. Esko, Kurt Drickamer, Anne Dell, and James C. Paulson. (2005) A Focused Microarray Approach to Functional Glycomics: Transcriptional Regulation of the Glycome.
Data processing
dCHIPv1.3, PM-only algorithm
Submission date
Jun 08, 2005
Last update date
Jun 20, 2005
Contact name
Jennifer A Hammond
E-mail(s)
[email protected] Phone
(858) 784-2263
Fax
(858) 784-2754
URL
http://www.scripps.edu/researchservices/dna_array/ Organization name
The Scripps Research Institute
Lab
DNA Array Core Facility
Street address
10550 N. Torrey Pines Rd.
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platform ID
GPL1981 Series (1)
GSE2781 A Focused Microarray Approach to Functional Glycomics: Transcriptional Regulation of the Glycome
Data table header descriptions ID_REF VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 115855_U74BTARSEQ_at
494.632
A
0.111572
1405_i_at
241.137
A
0.979337
200004_at
3905.98
P
0.000244
200010_at
611.801
P
0.030273
200012_x_at
2127.31
P
0.01416
200017_at
343.247
P
0.000244
200024_at
1200.09
A
0.111572
200025_s_at
67.0204
A
0.067627
200026_at
1082.56
P
0.00293
200032_s_at
288.873
P
0.010742
200038_s_at
186.791
A
0.080566
200046_at
257.553
P
0.005859
200061_s_at
73.2631
A
0.171387
200068_s_at
199.897
A
0.366211
200089_s_at
196.096
A
0.366211
200091_s_at
225.639
A
0.171387
200095_x_at
224.128
P
0.005859
200642_at
321.152
A
0.246094
200643_at
343.116
A
0.80542
200647_x_at
256.392
A
0.366211
1814 54 Kbytes .Supplementary data files not provided
