|
| Status |
Public on Jan 20, 2011 |
| Title |
515B |
| Sample type |
RNA |
| |
|
| Source name |
Human dopamine
|
| Organism |
Homo sapiens |
| Characteristics |
age (y): 78
disease state: Parkinson’s disease
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA from 500 DA neurons from the SNc of each specimen were extracted using the Picopure™ RNA isolation kit
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
standard Affy protocols
|
| Scan protocol |
standard Affy protocols
|
| Description |
PD
|
| Data processing |
The data were processed and scaled to a target intensity of 100 for all probe sets by MAS5 in Biocondutor affy package.
|
| |
|
| Submission date |
Sep 27, 2010 |
| Last update date |
Jan 20, 2011 |
| Contact name |
Bin Zheng |
| Organization name |
Brigham and Women's hospital
|
| Department |
Center for Neurologic Diseases
|
| Street address |
65 Landsdowne Street
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02139 |
| Country |
USA |
| |
|
| Platform ID |
GPL1352 |
| Series (1) |
| GSE24378 |
Systematic meta-analysis and replication of genome-wide expression studies identifies molecular pathways of Parkinson’s disease |
|
