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Sample GSM559431 Query DataSets for GSM559431
Status Public on Jun 25, 2010
Title Normal B Cell Control 10 Jel108U133A
Sample type RNA
 
Source name Purified B cells from peripheral blood from donors 60 years of age and older
Organism Homo sapiens
Characteristics disease state: normal
cell type: Purified B cells from peripheral blood from donors 60 years of age and older
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA isolation by the Trizol method following manufacturer's protocol from purified B cells
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Enzo, New York, NY).
 
Hybridization protocol 15ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Human U133 A and B GeneChipsĀ® . GeneChips were washed and stained following the Expression Analysis Technical Manual, Affymetrix, Santa Clara, CA
Scan protocol Hybridized arrays were scanned using a GeneChipĀ® 3000 scanner
Description Gene expression data from peripheral blood B cells age matched normal controls
Data processing Affymetrix GeneChipĀ® Operating System software v.1.3 (Santa Clara, CA) were used to quantitatively analyze the scanned image
 
Submission date Jun 23, 2010
Last update date Jun 24, 2010
Contact name Brian Bot
Organization name Mayo Clinic
Street address 200 1st Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Platform ID GPL96
Series (1)
GSE22529 Gene expression profiles in CLL

Data table header descriptions
ID_REF
VALUE log2, fastlo normalized, rma summarized

Data table
ID_REF VALUE
1007_s_at 5.95055422
1053_at 4.722674015
117_at 4.093029314
121_at 3.261026531
1255_g_at 1.963248507
1294_at 6.657113156
1316_at 3.300940153
1320_at 2.641223676
1405_i_at 7.370272255
1431_at 3.047765953
1438_at 1.827946493
1487_at 4.579847716
1494_f_at 2.700348573
1598_g_at 0.820138684
160020_at 1.698473406
1729_at 6.753079203
1773_at 1.636236226
177_at 3.140191149
179_at 1.362819774
1861_at 1.340246966

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM559431_Jel108U133A.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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