NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM559414 Query DataSets for GSM559414
Status Public on Jun 25, 2010
Title Normal B Cell Control 7 Jel055A
Sample type RNA
 
Source name Purified B cells from peripheral blood from donors 60 years of age and older
Organism Homo sapiens
Characteristics disease state: normal
cell type: Purified B cells from peripheral blood from donors 60 years of age and older
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA isolation by the Trizol method following manufacturer's protocol from purified B cells
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Enzo, New York, NY).
 
Hybridization protocol 15ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Human U133 A and B GeneChipsĀ® . GeneChips were washed and stained following the Expression Analysis Technical Manual, Affymetrix, Santa Clara, CA
Scan protocol Hybridized arrays were scanned using a GeneChipĀ® 3000 scanner
Description Gene expression data from peripheral blood B cells age matched normal controls
Data processing Affymetrix GeneChipĀ® Operating System software v.1.3 (Santa Clara, CA) were used to quantitatively analyze the scanned image
 
Submission date Jun 23, 2010
Last update date Jun 24, 2010
Contact name Brian Bot
Organization name Mayo Clinic
Street address 200 1st Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Platform ID GPL96
Series (1)
GSE22529 Gene expression profiles in CLL

Data table header descriptions
ID_REF
VALUE log2, fastlo normalized, rma summarized

Data table
ID_REF VALUE
1007_s_at 5.21368456
1053_at 4.924895351
117_at 4.2462105
121_at 3.918391736
1255_g_at 1.889993568
1294_at 6.79900589
1316_at 3.281373843
1320_at 2.620495507
1405_i_at 4.905205239
1431_at 3.081787619
1438_at 1.776907915
1487_at 4.516603488
1494_f_at 2.7105237
1598_g_at 0.623070152
160020_at 1.578239515
1729_at 6.767141138
1773_at 1.527481047
177_at 3.194942304
179_at 1.240528647
1861_at 1.188375535

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM559414_Jel055A.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap