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Sample GSM559401 Query DataSets for GSM559401
Status Public on Jun 25, 2010
Title Normal B Cell Control 6 Jel041U133A
Sample type RNA
 
Source name Purified B cells from peripheral blood from donors 60 years of age and older
Organism Homo sapiens
Characteristics disease state: normal
cell type: Purified B cells from peripheral blood from donors 60 years of age and older
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA isolation by the Trizol method following manufacturer's protocol from purified B cells
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Enzo, New York, NY).
 
Hybridization protocol 15ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Human U133 A and B GeneChipsĀ® . GeneChips were washed and stained following the Expression Analysis Technical Manual, Affymetrix, Santa Clara, CA
Scan protocol Hybridized arrays were scanned using a GeneChipĀ® 3000 scanner
Description Gene expression data from peripheral blood B cells age matched normal controls
Data processing Affymetrix GeneChipĀ® Operating System software v.1.3 (Santa Clara, CA) were used to quantitatively analyze the scanned image
 
Submission date Jun 23, 2010
Last update date Jun 24, 2010
Contact name Brian Bot
Organization name Mayo Clinic
Street address 200 1st Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Platform ID GPL96
Series (1)
GSE22529 Gene expression profiles in CLL

Data table header descriptions
ID_REF
VALUE log2, fastlo normalized, rma summarized

Data table
ID_REF VALUE
1007_s_at 5.039765486
1053_at 5.592710836
117_at 3.589115436
121_at 3.642925058
1255_g_at 1.96321513
1294_at 6.330424542
1316_at 3.31748485
1320_at 2.648666453
1405_i_at 5.315885227
1431_at 3.053853533
1438_at 1.851649219
1487_at 4.540563865
1494_f_at 2.723871232
1598_g_at 0.816952796
160020_at 1.681590819
1729_at 7.628519059
1773_at 1.641517047
177_at 3.143851045
179_at 1.444466946
1861_at 1.365452412

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM559401_Jel041U133A.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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