NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM559397 Query DataSets for GSM559397
Status Public on Jun 25, 2010
Title Normal B Cell Control 5 Jel037U133A
Sample type RNA
 
Source name Purified B cells from peripheral blood from donors 60 years of age and older
Organism Homo sapiens
Characteristics disease state: normal
cell type: Purified B cells from peripheral blood from donors 60 years of age and older
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA isolation by the Trizol method following manufacturer's protocol from purified B cells
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Enzo, New York, NY).
 
Hybridization protocol 15ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Human U133 A and B GeneChipsĀ® . GeneChips were washed and stained following the Expression Analysis Technical Manual, Affymetrix, Santa Clara, CA
Scan protocol Hybridized arrays were scanned using a GeneChipĀ® 3000 scanner
Description Gene expression data from peripheral blood B cells age matched normal controls
Data processing Affymetrix GeneChipĀ® Operating System software v.1.3 (Santa Clara, CA) were used to quantitatively analyze the scanned image
 
Submission date Jun 23, 2010
Last update date Jun 24, 2010
Contact name Brian Bot
Organization name Mayo Clinic
Street address 200 1st Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Platform ID GPL96
Series (1)
GSE22529 Gene expression profiles in CLL

Data table header descriptions
ID_REF
VALUE log2, fastlo normalized, rma summarized

Data table
ID_REF VALUE
1007_s_at 5.256312433
1053_at 5.214861931
117_at 4.877613096
121_at 3.400245096
1255_g_at 1.999572914
1294_at 6.415687704
1316_at 3.504205251
1320_at 2.792808191
1405_i_at 4.5130155
1431_at 3.2246246
1438_at 1.865950718
1487_at 4.515674833
1494_f_at 2.696200672
1598_g_at 0.679934565
160020_at 1.702790883
1729_at 6.439012403
1773_at 1.635656355
177_at 3.215279564
179_at 1.333239876
1861_at 1.256784417

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM559397_Jel037U133A.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap