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Sample GSM559391 Query DataSets for GSM559391
Status Public on Jun 25, 2010
Title Normal B Cell Control 3 Jel028U133A
Sample type RNA
 
Source name Purified B cells from peripheral blood from donors 60 years of age and older
Organism Homo sapiens
Characteristics disease state: normal
cell type: Purified B cells from peripheral blood from donors 60 years of age and older
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA isolation by the Trizol method following manufacturer's protocol from purified B cells
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Enzo, New York, NY).
 
Hybridization protocol 15ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Human U133 A and B GeneChipsĀ® . GeneChips were washed and stained following the Expression Analysis Technical Manual, Affymetrix, Santa Clara, CA
Scan protocol Hybridized arrays were scanned using a GeneChipĀ® 3000 scanner
Description Gene expression data from peripheral blood B cells age matched normal controls
Data processing Affymetrix GeneChipĀ® Operating System software v.1.3 (Santa Clara, CA) were used to quantitatively analyze the scanned image
 
Submission date Jun 23, 2010
Last update date Jun 24, 2010
Contact name Brian Bot
Organization name Mayo Clinic
Street address 200 1st Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Platform ID GPL96
Series (1)
GSE22529 Gene expression profiles in CLL

Data table header descriptions
ID_REF
VALUE log2, fastlo normalized, rma summarized

Data table
ID_REF VALUE
1007_s_at 5.392301505
1053_at 4.861866068
117_at 4.399187824
121_at 3.780693446
1255_g_at 2.116197622
1294_at 7.24445933
1316_at 3.54266782
1320_at 2.790472173
1405_i_at 4.090838448
1431_at 3.175535638
1438_at 1.982333174
1487_at 4.503260331
1494_f_at 2.878672714
1598_g_at 0.963037412
160020_at 1.833158126
1729_at 6.514077324
1773_at 1.800757201
177_at 3.269165618
179_at 1.563267084
1861_at 1.492006511

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM559391_Jel028U133A.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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